Pseudomonas graminis: FX982_01285
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Entry
FX982_01285 CDS
T06934
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pgg
Pseudomonas graminis
Brite
KEGG Orthology (KO) [BR:
pgg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgg03021
]
FX982_01285
Transcription machinery [BR:
pgg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FX982_01285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
IF2_N
ImpA_N
SANT_DAMP1_like
Motif
Other DBs
NCBI-ProteinID:
QKF50348
UniProt:
A0A1C2DM29
LinkDB
All DBs
Position
complement(1387430..1388284)
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AA seq
284 aa
AA seq
DB search
MTNSLQPAYALVPGANLEAYVHTVNSIPLLTPEQERELAESLYYEQDLGAARQMVLAHLR
FVVHIARSYSGYGLAQADLIQEGNVGLMKAVKRFNPEMGVRLVSFAVHWIKAEIHEFILR
NWRIVKVATTKAQRKLFFNLRSQKKRLAWLNNEEVHRVAESLGVEPREVREMESRLTGHD
MAFDPAAEADDDSAFQSPANYLEDHRYDPARQLEDSDWTDSSTANLHEALNVLDDRSRDI
LYQRWLAEEKATLHDLAEKYNVSAERIRQLEKSAMNKLKLSIAA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaccaattctttgcaacctgcgtatgccttagtcccgggtgcaaacctggaagcctat
gtgcacacggttaacagcattccactgctgacgcccgagcaggagcgtgaactggccgag
agtctctactatgagcaggatttgggggcggctcggcagatggtgctcgcccacctgcga
tttgtcgtgcatatcgcacgcagttattccggttatggactggctcaggctgacctgatt
caggaaggtaacgttggcctgatgaaggccgtgaagcgcttcaaccccgagatgggtgtg
cgcctggtgtcctttgccgtgcactggatcaaggccgagattcacgagttcatcctgcgc
aactggcgcatcgtgaaggtcgcgaccaccaaggctcagcgcaagctgttcttcaacctg
cgcagccagaagaagcgtctggcctggctgaacaacgaagaagtgcatcgcgtcgccgag
agtctgggcgttgagccccgtgaagtgcgcgagatggaaagccgtctgactggccacgac
atggccttcgacccggcggcagaagccgacgatgacagcgccttccagtcgccagccaac
tacctggaagaccatcgttacgatccggcgcgtcagctggaagattccgactggactgac
agctcgacggccaacctgcacgaagcgctgaacgtgctcgacgatcgcagccgcgacatt
ctgtatcagcgctggctggcggaagagaaggccacgctgcacgacctggccgagaagtac
aacgtctccgccgagcgtattcgtcagctcgaaaagagcgcgatgaacaagctgaaactg
tcgatcgctgcctga
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