Pseudomonas graminis: FX982_01554
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Entry
FX982_01554 CDS
T06934
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pgg
Pseudomonas graminis
Pathway
pgg03420
Nucleotide excision repair
pgg03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pgg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FX982_01554
03430 Mismatch repair
FX982_01554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgg03400
]
FX982_01554
Enzymes [BR:
pgg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FX982_01554
DNA repair and recombination proteins [BR:
pgg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FX982_01554
MMR (mismatch excision repair)
Other MMR factors
FX982_01554
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
QKF50610
UniProt:
A0A6M8MHN5
LinkDB
All DBs
Position
complement(1701091..1703274)
Genome browser
AA seq
727 aa
AA seq
DB search
MRDDLSLLLNSLNDAQRQAVAASVGRQLVLAGAGSGKTRVLVHRIAWLIQVENASPHSIL
SVTFTNKAAAEMRHRIEQLMGINPAGMWVGTFHGLAHRLLRAHWQEAGLNQSFQILDSDD
QQRLVKRVMRELNLDEQRWPARQAQWFINGQKDEGLRPKHIQASGDLFLTTMKSVYEAYE
AACQRAGVIDFSELLLRALDLWRDNPSLLAHYQRRFRHVLVDEFQDTNAVQYAWLRLLAQ
GGDSLMVVGDDDQSIYGWRGAKIENIHQYSEDFPDTETIRLEQNYRSTASILKAANGLIV
NNTGRLGKELWTDVGDGELISLYAAFNEHDEARYVVETIESAIKTGLARSDIAILYRSNA
QSRVLEEALLRERIPYRIYGGQRFFERAEIKNAMAYMRLLDGRGNDSALERVINVPPRGI
GEKTVEAIREHARHADVSMWEAMRLLVANKGLAGRAASALGAFIELIENLAAKAADMPLH
LMTQTVIEQSGLITYHKEEKGEKGQARVENLEELVSAARAFENSDEEEDLTPLAAFLGHA
SLEAGDTQADEHEDSIQLMTLHSAKGLEFPYVFLVGMEEGLFPHKMSLEEPGRLEEERRL
AYVGITRAMQHLVMTYAETRRLYGSETYNKVSRFVREVPPNLIQEVRLSNSVTRPFGGSK
TMAPSRLFDGEAIPQSQFSLGQHVQHAVFGEGVILNFEGSGAQARVQVNFSEGSKWLMLG
YAKLEPV
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgatgacctctcccttctgcttaattccctcaacgatgcccaacgccaggccgta
gctgcctccgtgggtcgtcagttggtcctggccggcgctggttccggcaaaacccgtgtg
ttggtgcaccgtatcgcctggttgatccaggtcgagaacgcctcgccgcactcgatcctg
tcggtgacgttcaccaacaaggccgctgccgagatgcgccatcgcatcgagcaattgatg
ggtatcaacccggccggcatgtgggtgggcaccttccacggcctggcgcatcgcctgctc
cgggcgcactggcaggaagcggggctgaatcaaagcttccagattcttgacagcgatgac
caacagcgactggtcaagcgcgtcatgcgcgagctgaatcttgatgagcagcgctggccg
gcacggcaggcgcagtggttcatcaatgggcagaaggacgaagggctgcgccccaagcac
attcaggcttcgggcgacctgtttctaacgaccatgaagtcggtctacgaggcgtacgaa
gcggcctgtcagcgcgctggcgttattgacttctccgagttgctgcttcgggcgctggac
ctttggcgcgacaacccgagcctgcttgcgcattaccagcgtcgtttccgccacgtgctg
gtggacgaattccaggacaccaacgccgttcaatacgcctggttgcgcctgctcgcccag
ggtggcgacagcctgatggtggtcggcgacgacgatcagtccatttacggctggcgcggc
gcgaagatcgagaatattcatcagtattccgaagacttccccgacaccgagaccattcgc
ctggagcaaaactatcgctccaccgcgagcatcctcaaggccgccaacggtttgatcgtc
aacaacaccgggcgtctgggcaaagagctgtggacggacgtcggcgatggcgaactgatc
agcctttacgcagcattcaacgaacacgacgaagcgcgctacgtggtcgagaccattgaa
agcgcgatcaagaccggcctcgcgcgcagcgacatcgccattctgtaccgctccaacgcc
caatcacgggtacttgaagaagccttgctgcgcgagcgcatcccgtaccgtatctacggt
ggccagcgattcttcgagcgcgccgaaatcaagaacgccatggcgtatatgcgcctgctt
gacggtcgcggcaacgattcagcgctggagcgggtgatcaacgttccacctcgcggtatc
ggcgagaaaaccgtcgaagccatccgcgagcacgcgcgccatgccgacgtgtcgatgtgg
gaggccatgcgcctgctggtcgccaacaaaggcttggccggtcgtgcggcgagcgcgctg
ggcgcgttcatcgaactgatcgaaaacctcgccgcgaaggccgcagacatgcccctgcac
ctgatgacccaaacggtcatcgagcagtccggcctgatcacgtaccacaaggaagaaaaa
ggcgagaaaggccaggcccgggtggaaaaccttgaggaactggtcagcgccgcgcgcgct
ttcgagaacagtgacgaagaggaagacctgacgccgctggctgcattcctcgggcacgcc
tcgttggaggcaggcgatacgcaggcggatgagcacgaagacagcattcagttgatgacg
ctgcacagcgccaaaggtctggagttcccgtacgtcttcctggtgggcatggaagaaggc
ctgtttccgcacaagatgagcctggaagagccggggcgtctggaagaagagcgtcgtctg
gcttacgtgggcatcacccgcgcgatgcagcatctagtgatgacatacgcagaaacccga
cgcctgtacggcagcgaaacctacaacaaggtctcgcgcttcgtacgggaggtcccgccc
aacctgattcaggaagtgcggctgtccaacagcgtgacccgtccgttcggcggctccaaa
accatggccccaagtcgtctgttcgatggcgaagccattccgcagagccagttctccctg
ggtcagcacgtgcagcatgcggtgtttggtgaaggcgtgatcctcaacttcgagggttca
ggcgctcaggcacgggtccaggtgaatttctcggaaggcagcaagtggctgatgctgggg
tacgcgaagcttgagcctgtgtga
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