Pseudomonas graminis: FX982_01656
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Entry
FX982_01656 CDS
T06934
Name
(GenBank) Diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pgg
Pseudomonas graminis
Pathway
pgg00300
Lysine biosynthesis
pgg00470
D-Amino acid metabolism
pgg01100
Metabolic pathways
pgg01110
Biosynthesis of secondary metabolites
pgg01120
Microbial metabolism in diverse environments
pgg01230
Biosynthesis of amino acids
Module
pgg_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pgg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FX982_01656
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FX982_01656
Enzymes [BR:
pgg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
FX982_01656
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QKF50712
UniProt:
A0A6M8MKN4
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Position
complement(1813615..1814862)
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AA seq
415 aa
AA seq
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MDAFNYRDGELFAEGVALSAIAERFGTPTYVYSRAHIEAQYRAYADALSGMPYLVCYAVK
ANSNLGVLNVLARLGAGFDIVSRGELERVLAAGGQADKIVFSGVGKTRDDMRRALEVGVH
CFNVESTDELERLQVVAAEMGVRAPVSLRVNPDVDAGTHPYISTGLKENKFGIAIADAED
VYIRAAQLPNLDVIGVDCHIGSQLTTLSPFVDALDRLLDLVDRLGDCGILLKHIDLGGGL
GVRYRDEEPPLAGDYINAVRERLDGRDLALMFEPGRFIVANAGVLLTRVEYLKHTEHKDF
AIVDAAMNDLIRPALYQAWMDVTAVRPRDGAKRTYDIVGPICETGDFLAKERELALAEGD
LLAVHSAGAYGFVMSSNYNTRGRTAEVLVDGEQAFEVRRRETVTELFAGESLLPE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atggacgccttcaactaccgcgacggtgagctgttcgcggaaggagtggcgttgtctgcc
atcgccgaacgcttcggcacgccgacatacgtctattcccgcgcgcacatcgaggcgcag
tatcgtgcctacgccgacgccctgagcggcatgccgtatttggtctgttacgcggtcaaa
gccaactccaacctgggtgttctcaatgtcctggcgcgcctgggcgccggtttcgacatc
gtttcccgtggcgaactggagcgcgtactggcggcaggcggtcaggccgacaagattgtc
ttttccggcgtcggcaagacccgtgatgacatgcgccgagccctcgaagtcggcgtacat
tgctttaatgtcgaatccaccgacgaactcgaacgcctgcaagtcgttgccgccgaaatg
ggcgtgcgcgccccggtttcgttgcgcgtcaacccggacgtcgacgccggcacccacccc
tacatctccaccggcctcaaggaaaacaaattcggcatcgccatcgcggacgccgaagac
gtttacatccgcgccgcgcagctaccgaatcttgacgttattggcgtcgactgccacatc
ggctcccaactgaccacgctctcgcctttcgtggatgccctggatcgcttgctcgatctg
gtcgaccgcctgggcgattgcggcattctgctgaagcatatcgatctgggcggcggtctg
ggtgtgcgttatcgcgacgaagagccgccactcgcgggcgattacatcaacgccgtgcgt
gaacgcctcgatggccgcgatctggcgctgatgttcgagcccggccgcttcatcgtggcc
aatgccggcgtgctgctgacccgcgtcgagtacctcaagcacaccgagcacaaagacttc
gctatcgtcgacgccgccatgaacgacctgattcgtccggcgctgtaccaggcgtggatg
gacgtaactgcggtcaggccccgtgacggcgccaaacgcacctacgacatcgtcggcccg
atctgcgaaaccggggatttcctggccaaagagcgcgaactcgcgctggctgaaggcgat
ttgctggccgtgcattccgccggcgcctatggcttcgtgatgagctccaactacaacacc
cgcggacgtacggccgaggtgcttgtggatggcgagcaagccttcgaagtgcgtcgccgt
gaaaccgtgactgagctgtttgccggcgaaagcctgctgccggagtaa
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