Pseudomonas graminis: FX982_02246
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Entry
FX982_02246 CDS
T06934
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pgg
Pseudomonas graminis
Pathway
pgg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FX982_02246
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgg03019
]
FX982_02246
03016 Transfer RNA biogenesis [BR:
pgg03016
]
FX982_02246
Enzymes [BR:
pgg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FX982_02246
Messenger RNA biogenesis [BR:
pgg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FX982_02246
Transfer RNA biogenesis [BR:
pgg03016
]
Prokaryotic type
tRNA degradation factors
FX982_02246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH-I_KHDC4-BBP
KH_2
KH_N4BP1_2nd
S1_2
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
QKF51290
UniProt:
A0A6M8MJY3
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All DBs
Position
2480933..2483038
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AA seq
701 aa
AA seq
DB search
MNPVIKKFQFGQSTVTLETGRIARQASGAVLVTVDDDVTVLVTVVGAKHADASKGFFPLS
VHYQEKTYAAGKIPGGFFKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVVCTVVST
SKKTDPDVAAMIGTSAALAISGIPFDGPIGAARVAFHESTGYLLNPTYEQLKASSLDMVV
AGTEEAVLMVESEAKELTEDQMLGAVLFAHDEFQSVIKAVKELAAEAANPTWNWAPKAEA
TELLGAIRSEFGAAISEAYTITVKADRYARLGELKDQIVAKLAVEDGSPSASEVKAAFGE
IEYRTVRENIVNGKPRIDGRDTKTVRPLNIEVGVLPKTHGSALFTRGETQALVVATLGTA
RDAQLLDTLEGEKKDPFMLHYNFPPFSVGECGRMGGAGRREIGHGRLARRSVQAMLPAAD
VFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPMKAPVAGIAMGLVKEGEKFAILT
DILGDEDHLGDMDFKVAGTAKGVTALQMDIKIKGITEEIMEIALGQALEARLNILGQMNT
IIGQSRTELSENAPTMIAMKIDTDKIRDVIGKGGATIRAICEETKASIDIEDDGSIKIFG
ETKEAAEAARQRVLGITAEAEIGKIYVGKVERIVDFGAFVNILPGKDGLVHISMLSDARV
EKVTDILKEGQEVEVLVLDVDNRGRIKLSIKDVAAAKASGV
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgaacccggtaatcaagaaatttcaattcggtcaatcgaccgtaaccctcgagactggc
cgcattgcccgtcaagcctctggtgctgtattggtcaccgttgacgacgacgtcaccgtt
ctcgtgactgtggtcggcgccaagcatgcagacgcgagcaaaggctttttccctctttcc
gttcactaccaggaaaagacctacgccgctggcaagatccctggtggtttcttcaagcgt
gaaggccgtccttccgaaaaagaaacactgacctcgcgtttgatcgaccgtccgatccgc
ccactgtttccggaaggcttcatgaacgaagtgcaggttgtctgcactgtcgtctccacc
agcaagaaaaccgatccggacgtcgctgcgatgatcggtacgtccgctgccctggcaatc
tccggcattccgttcgacggcccgatcggtgccgcgcgcgttgctttccacgagagcacc
ggctacctgctgaacccgacttacgagcaactgaaagcatcgagcctggacatggtcgtt
gccggtaccgaagaagcggtactgatggttgaatcggaagccaaagaactgaccgaagac
cagatgctgggcgctgtgctgttcgcccacgacgaattccagtcggttatcaaggccgtc
aaagagctggccgccgaagctgccaatccaacctggaattgggcgccgaaagccgaagcc
actgaactgctgggcgccatccgctccgagttcggcgcagcgatctccgaggcctacacc
atcaccgtcaaggccgatcgttatgctcgcctgggtgagctgaaggatcagatcgttgcc
aagctggctgttgaagacggcagcccgtccgcaagtgaagtgaaagcagccttcggcgaa
atcgaataccgcaccgttcgcgagaacatcgtcaacggcaagccgcgtatcgatggtcgc
gacaccaagactgtgcgtccgctgaacatcgaagtcggcgttctgccgaagactcacggt
tctgcactgttcacccgtggcgagactcaggcgctggtcgtggccaccctgggtactgcg
cgtgacgctcagttgctcgacaccctcgaaggcgagaaaaaagacccgttcatgctgcac
tacaacttccctccgttctcggtgggcgagtgtggtcgcatgggtggcgcaggtcgtcgt
gaaatcggtcacggccgtctggcccgccgttcggttcaggccatgctgcctgctgccgac
gtattcccgtacaccattcgtgtcgtatcggaaatcaccgagtccaacggttccagctcc
atggcttcggtctgtggtgcttcgctggccctgatggacgctggtgttccgatgaaggcg
ccggttgccggtatcgccatgggtctggttaaagaaggcgagaagttcgccatcctgacc
gacatcctgggtgacgaagaccacctgggcgacatggacttcaaagtggccggtaccgcc
aaaggtgtgaccgcgctgcagatggacatcaagatcaagggcatcaccgaagagatcatg
gagatcgctttgggtcaggcgctggaagcgcgtctgaacatcctgggtcagatgaacacc
atcatcggtcagtcgcgcaccgagctgtcggaaaacgcgccgaccatgatcgcgatgaag
atcgacaccgacaagatccgtgacgtgatcggcaaaggcggcgcgaccatccgtgccatc
tgcgaagagaccaaagcgtcgatcgatatcgaagacgacggctcgatcaagatcttcggc
gaaaccaaggaagcggctgaagctgcacgtcagcgcgttctgggtattaccgctgaagcc
gagatcggcaagatctacgttggcaaggtcgagcgcattgtcgacttcggcgcgttcgtc
aacatcctgccgggcaaagacggtctggtgcacatctccatgttgagcgacgctcgcgtt
gagaaagtcaccgacatcttgaaagaaggtcaggaagtcgaagtgctggtactggacgtg
gataaccgcggccgcatcaagctgtcgatcaaagacgtcgcagctgccaaggcgtcgggg
gtttaa
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