Pseudomonas graminis: FX982_02321
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Entry
FX982_02321 CDS
T06934
Name
(GenBank) RecBCD enzyme subunit RecC
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pgg
Pseudomonas graminis
Pathway
pgg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FX982_02321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgg03400
]
FX982_02321
Enzymes [BR:
pgg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FX982_02321
DNA repair and recombination proteins [BR:
pgg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FX982_02321
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QKF51360
UniProt:
A0A6M8MK47
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All DBs
Position
2570345..2573830
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AA seq
1161 aa
AA seq
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MPVTSNLNPGFMVVHGNRLDELRGLVVSWMRRYPLTPLENEVALVQSNGIAQWLKLALAE
DAQDDDQGGCGIAAAIDVQLPGSFMWQLYRAVLGKAEIPETSLLDKAPLTWRLMRLLPGL
INQPHFEPLQRFLTADTDLRKRCQLSERLADLFDQYQVYRADWLEDWAAGKHQLRTGRGE
PKPLKAENCWQAELWGALLHDVGAEGMAQSRAGVHQRYIERINSLVEAPAGLPARVIVFG
ISSLPAQALEALAGLARFSQVLLCVHNPCRHHWADIVADKDLLRHEYKRQSRKPGMPVVL
NPDALHQHAHPLLAAWGKQGRDYINLLDSHDDPNSYRSIFRDGRIDLFSESEPTTLLNQL
QDDILELRPLSETREVWPPVDIKTDRSIRFHVAHSAQREVEVLHDQLLARFSKDPDLRPR
DVIVMVPDIDSYAPHIRAVFGQLDRDDRRFIPFTLADQGQRGRDPLLIAVEHLLKIPESR
FPVSEILDLLDVPALRARFGIDERDLPTLHRWIEGAGIRWGLNAKQREGLGLPEQLEQNS
WHFGLRRMLLGYAVGAGAAYDGIQPYDEIGGLDAALIGPLVSLIDALQVAHNELSLPATP
AMWGARLQAIMQLFFMADSEHDDYLLSQLETLRETWLQTCENVGLEEELPLTVVREAWLA
GLDQGRLSQRFLAGSVNFCTLMPMRAIPFKIVCLLGMNDGDYPRAQPPLDFDLMGSDYRP
GDRSRREDDRYLLLEALLSARDQLYISWVGRSIRDNSERPASVLIGQLRDHLSSGWRLAD
AIKPEDDKKRDPGQQLLHKLTVEHPLQPFSAKYFQENPEFFSFAREWQVLHEAVTEAGET
KALQKHLQEEPLSLMQLQDFLRNPVKHFFSQRLKIFFEVAEAPLADEEPFVLDALERYGL
SDSLLQAALTDPEHIHESLTAQATRLQGSGLLPMAGFGTLLQDELIEPLPDLVARYHDLL
VRWPVRLHSALPVSYEHQVVELDGWVDGLYQNPQNDLLAITAIPNAIASKKTRKWHRLTK
PWVNHLVACACDLPLTTALVASDETLLLPPLDKDTATRTLNDLLLAWHQGMQRPLPIAVK
TAFAWLGQNDEVKAEAAARKAYEGDGQNTKGERAESTALARQFPDFDALLGSEEFVGWCE
ALYKPIFEAPWQALSREEAGA
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgacatccaatctcaaccccgggtttatggtggtccatgggaatcgcctggat
gagctgcgtggccttgtggtgtcatggatgcgacgttatcccctgacgccccttgaaaac
gaggtagcgctggtacaaagcaacggcattgcgcagtggctgaagctcgctttggcagaa
gatgcacaggacgacgatcaagggggttgcggcattgccgctgcgatcgatgtgcagctc
cctggcagctttatgtggcagctgtaccgtgcggtgttgggtaaagccgagattccagaa
acctcgttgcttgataaagcgcccctgacctggcgactgatgcgactgctccccggcctg
atcaaccaaccacatttcgagccgctgcagcgattcctgacggccgatacagacctgcgc
aagcgctgccagctctccgagcgactcgctgacctgttcgaccaatatcaggtgtaccgc
gccgactggttggaagattgggctgctggcaagcatcaactcaggaccggccggggagaa
ccaaagccgctgaaagcagagaactgctggcaagccgaactgtggggtgcactgctccat
gatgtcggtgcagagggcatggcccagagccgggccggcgtgcatcaacgttacatcgag
cgcattaatagcctggtcgaggcgccggccggtttaccggcgcgagtgatcgttttcggt
atttcctcattgccagcccaggcactggaagcgctggccgggctggcccgtttcagccag
gttctgctttgcgttcacaacccttgccgccatcactgggcggacatcgtggctgacaag
gatctcctgcgtcacgaatacaaacgtcaatcgcggaaacccggcatgccagtggtgcta
aaccctgatgcactgcaccagcatgctcatccgttgctggctgcgtggggcaagcagggt
cgtgactacatcaatctcctcgacagccatgatgacccgaatagctatcgttcgatcttt
cgcgacgggcgcatcgacctgttcagcgagagcgagcctacaacccttctgaaccaactc
caggacgatatcctcgagctgcgccccttgagcgagacccgcgaagtctggccgcccgtg
gatatcaagaccgaccgctcaatccgctttcatgtcgcccacagcgcccagcgcgaagtg
gaggtgctgcatgaccaactgctcgcgcgcttcagcaaagatccggaccttcgtcctcgg
gacgtcatcgtcatggtgccggacatcgacagctacgccccccacattcgcgcagtcttc
ggccaactggatcgcgacgaccgccgctttattccgttcaccctcgccgaccaaggccaa
cgtggccgtgatccgctgctgatcgccgtggagcacttgctaaagattccggaaagtcgg
ttcccggtcagtgaaatcctcgatctattggacgtccccgcattacgagcgcgatttggc
attgatgagcgagacctgccaaccctgcaccgctggattgaaggagcgggtatccgatgg
gggctcaatgcgaagcagcgtgaagggctggggctgccggaacagctcgagcagaatagc
tggcattttggtctgcgtcgcatgttgctgggctacgccgtcggtgcgggcgcggcttac
gacggcattcagccgtatgacgaaatcggcgggctggatgcggccctgattggccctctc
gtatccctgatcgacgcgcttcaggttgcacacaatgaactctcactgcctgcgacgccc
gcgatgtggggggcgcgccttcaggcgatcatgcagctgttcttcatggccgacagtgag
cacgacgactacttgctcagtcagctggaaaccctgcgtgaaacctggctgcagacctgc
gagaacgttggccttgaagaagagctgccgttgacggtcgtgcgtgaagcctggctggcg
gggctggatcaaggccgcttgtcccaacgctttctggccggatcggtcaacttctgcacg
ctgatgccgatgcgcgcgattcctttcaaaattgtctgcctgctgggcatgaacgacggc
gattacccccgagcccagcccccgctggatttcgatctgatgggcagcgactaccgtccc
ggcgaccgttcccgacgcgaggatgatcgttatctgttgttggaagccctgttgtccgcc
cgtgatcagctgtacatcagttgggtggggcgcagcattcgcgacaactctgagcggcca
gcttcggtgctcatcgggcagctgcgcgatcatctgtccagcggttggcggctggccgac
gccatcaagcccgaagatgataaaaagcgcgatccggggcagcagttgctgcacaaactc
accgtcgagcatccgctgcagccgttcagtgccaaatacttccaggagaacccggagttc
ttcagctttgcccgcgagtggcaggtgctgcacgaagctgtcaccgaagcaggggaaaca
aaagcactgcaaaagcacttgcaggaagagccgcttagcctgatgcagttgcaggatttc
ctgcgcaatccggtcaagcactttttcagtcagcgcttgaagatattcttcgaggttgcc
gaagcgcccttggcggacgaggagcctttcgtgctcgacgcgcttgagcggtatggcctc
agcgacagcctgttgcaagcagcgctcacggatcccgagcacattcatgaatcgctcacg
gctcaagcgacgcgcttgcagggcagcggactgctgccgatggcggggttcggtaccttg
ttgcaggatgagctgatcgaaccgctgccggatctggtcgcccgctaccacgacttgctg
gttcgctggccggtgcggctgcacagcgcgctgccggtcagttatgagcatcaggtcgtc
gaactcgatggatgggttgatgggctttatcagaaccctcagaacgacttacttgcgatc
accgctatccccaatgccattgccagcaagaagacgcgcaagtggcatcgtctgaccaag
ccgtgggtgaaccatctggtggcgtgcgcgtgcgatctgccgttgaccaccgcgctggtg
gccagcgacgaaaccctcttgctgccgccgctggacaaagacaccgccacgcgcaccctc
aacgacctgctgctggcctggcaccaaggcatgcagcgaccgctgccgattgcggtgaaa
acagcattcgcctggctggggcagaacgatgaagtcaaagccgaagccgccgcgcgcaag
gcctatgaaggggatggccagaacaccaagggcgagcgtgccgaaagcactgccctggcg
cgtcagttcccggacttcgacgcgctgctgggcagcgaagagttcgtgggctggtgcgag
gcattgtacaaaccgatttttgaagcgccctggcaggcactttctcgcgaggaggccggc
gcatga
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