Pseudomonas graminis: FX982_02607
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Entry
FX982_02607 CDS
T06934
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
pgg
Pseudomonas graminis
Brite
KEGG Orthology (KO) [BR:
pgg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pgg03009
]
FX982_02607
Enzymes [BR:
pgg01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
FX982_02607
Ribosome biogenesis [BR:
pgg03009
]
Prokaryotic type
ribosomal protein modification factors
FX982_02607
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
CLP1_P
TRAM
YajR_YAM
Matrix_Paramyxo_N
Motif
Other DBs
NCBI-ProteinID:
QKF51645
UniProt:
A0A1C2DUT4
LinkDB
All DBs
Position
complement(2898294..2899631)
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AA seq
445 aa
AA seq
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MSTVTTSAAPKVGFVSLGCPKALVDSERILTQLRMEGYQVVPTYQDADVVVVNTCGFIDS
AKAESLETIGEALAENGKVIVTGCMGVDESVIRNVHPSVLAVTGPQQYEQVVNAVHDAAP
PKLDHNPLIDLVPPQGVKLTPRHYAYLKISEGCNHSCSFCIIPSMRGKLVSRPIGDVLDE
AQRLVKAGVKELLVISQDTSAYGVDIKYRTGFWNGQPVRTRMTELCQALSSLGVWVRLHY
VYPYPHVDEIIPLMAAGKILPYLDIPFQHASPKILKLMKRPAFEDKTLARIKNWREQCPD
LIIRSTFIVGFPGETEEDFQYLLDWLTEAQLDRVGCFQYSPVEGAPANLLDAPIVPDDIK
QDRWDRFMAHQQAISAARLQMKIGKEIEVLIDEVDEQGFVGRSFFDAPEIDGNVFVESDR
DFKPGDKVMCRVVDADEYDLWAEPI
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccgtcaccacgtctgccgcccccaaggtcggctttgtcagcctcggttgcccg
aaggccctggtcgattccgaacgcatcctgacccagctgcgcatggaaggctatcaggtc
gttccgacctaccaggacgctgacgtggtcgtggtcaacacctgcggtttcatcgacagc
gccaaggctgaatccctcgagaccattggcgaggcgctggccgagaacggcaaagtgatc
gtcaccggctgcatgggcgtggacgaaagcgtgatccgcaatgtccatccgagcgtgctg
gccgtcaccggtccgcagcaatacgagcaagtggtcaatgccgtccacgacgccgccccg
ccgaagctcgatcacaacccgctgatcgatctggtgccgccgcaaggggtcaagctgacc
ccgcgtcattacgcgtacctgaagatttccgaaggctgcaatcacagctgcagcttctgc
atcatcccgtccatgcgcggcaagctggtcagccgcccgattggcgatgtgctcgacgaa
gcccagcgtctggtcaaagccggtgtgaaagagctgctggtgatctcccaggacaccagc
gcctacggcgtcgacatcaagtaccgcaccggtttctggaacggccagccggtccgcacg
cgcatgaccgagctgtgccaggccctgagctcgttgggtgtgtgggtacgcctgcactac
gtttacccgtacccgcacgtcgacgagatcattccgttgatggcggcgggcaagatcctg
ccgtacctggacatcccgttccagcacgccagcccgaagattctcaagctgatgaaacgc
ccggccttcgaagacaagaccctggcgcgcatcaagaactggcgcgaacagtgcccggac
ctgatcatccgttcgaccttcatcgtcggcttcccgggtgagaccgaagaagacttccag
tacctgctggactggctgactgaagcacagctcgatcgcgtcggctgcttccagtactcc
cctgtcgaaggtgcgccggcgaacctgctggatgcgccgatcgttccggacgacatcaag
caggatcgctgggaccgcttcatggcgcaccagcaagccatcagtgccgcacgcctgcag
atgaaaatcggcaaggaaatcgaagtgctgatcgacgaagtggacgagcagggcttcgtc
ggccgttcgttcttcgatgcgccggaaatcgacggcaacgtcttcgtcgaaagcgaccgt
gatttcaaaccgggcgacaaggtcatgtgccgcgtggtggatgccgatgagtacgacctg
tgggctgagccgatctaa
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