Pseudomonas graminis: FX982_02863
Help
Entry
FX982_02863 CDS
T06934
Name
(GenBank) Acetoin catabolism regulatory protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pgg
Pseudomonas graminis
Brite
KEGG Orthology (KO) [BR:
pgg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgg03000
]
FX982_02863
Transcription factors [BR:
pgg03000
]
Prokaryotic type
Helix-turn-helix
Other families
FX982_02863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
HTH_30
HTH_7
AAA_5
HTH_23
AAA_2
HTH_20
HTH_11
HTH_3
HTH_17
HTH_22
HTH_10
HTH_29
Mg_chelatase
PAS_7
HTH_24
AAA_7
HTH_28
nSTAND6
HTH_26
dnstrm_HI1420
HTH_38
AAA_3
Phage_CP76
HTH_psq
nSTAND3
HTH_36
Xre-like-HTH
HTH_AsnC-type
DUF2089
AAA
MerR
TetR_N
HTH_Tnp_1
Motif
Other DBs
NCBI-ProteinID:
QKF51891
UniProt:
A0A6M8MQA5
LinkDB
All DBs
Position
complement(3205092..3206951)
Genome browser
AA seq
619 aa
AA seq
DB search
MATPGASPSHDTIIQDSWARCREFGLDHQSRPSFGRLPDQQVSQLLERHHSLVQTTHQQV
LPFYENILSNSNCLILLADQQGQVLNSWGNKRFVEPDQQPGFVAGASWLEQSAGTNAIGT
ALACEQAVHIEHDEHFLKANRFMTGSAAPIFDASRRMIAVLDVSSDSFLPPSHTLGMVKM
MGQTIENRLILDQFQHSHFQLVFNTGLNNLDSQWAGLLVFDESGRVLCANRRADNLLGVS
LLNANIENLFKAPIADLLDQPEGQPFPLQASGHNRFHCVLKRPKAPVLKLRTVPTPMPVQ
VASRPVTVSAIEPGLGDERVEKAARQGQRLLEKNVPLLILGETGVGKEVFVKALHRASSR
ADQPMIAVNCAAIPSELVEAELFGYERGAFTGAHHKGSIGLIRKADKGTLFLDEIGDMPL
PVQARLLRVLQERCVQPVGSSELYPVDIRVISATHCSLREHVQNGRFRQDLYYRISGLNL
ELPPLRDRSDKPALVRAIWEQHREPQQTAGFETQVMELFERHPWPGNLRQLSNVIQVALA
LADDQPISTEHLPEDFFADLAMGCERVEPETVLNRKAALDTPEELSELLQAAGGNISQLA
KRLGVSRNTLYKRLREQGF
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggccacaccaggcgcatcccccagccacgacaccatcattcaggactcttgggcccgt
tgccgcgagttcggcctcgaccatcagtcgcgcccgtctttcggccggctgcccgatcag
caggtgtcgcaactgctcgagcgccatcattctctggtgcagaccacccaccagcaggtg
ctgcccttctacgaaaacatcctgagcaactccaattgcctgatcctgctcgccgatcag
cagggccaggtgctgaattcctggggcaacaagcgcttcgtcgagccagatcaacaaccg
ggtttcgtcgccggggccagctggctggagcaaagcgccggcaccaatgccattggcacg
gccctggcgtgtgaacaggctgttcacattgaacacgatgaacactttctcaaggccaac
cgtttcatgaccgggtcggcggcgccgatttttgatgcgtcgcggcggatgatcgcagtg
ctcgatgtgtccagcgacagcttcctgccgccctcccacacccttgggatggtcaagatg
atgggccagaccatcgaaaaccggttgatcctcgaccaattccagcacagccatttccag
ctggtgttcaataccggcctgaacaacctcgacagccagtgggccgggctgctggtgttc
gacgaaagcggccgggtgctctgtgccaaccgccgcgccgacaaccttttgggcgtcagc
ctgctcaacgccaacatcgaaaacctgttcaaggcgcccatcgccgacctgcttgatcaa
ccggaaggccagcctttcccgcttcaggcgtcggggcataaccgttttcattgtgtgctg
aagcggccgaaagcgccggtgctcaagctcaggacggtgccgacgccaatgccggttcag
gttgcctcacggcctgtcactgtcagcgccattgagccaggtctgggggatgagcgtgtc
gagaaagccgcccgtcaggggcaacgattgctggagaagaacgttccgctgttgatcctc
ggcgaaacgggtgtgggcaaggaagttttcgtcaaagccctgcaccgcgccagctcccgc
gccgatcagccgatgatcgccgtgaactgcgcggcgattccgtcggagttggtcgaggcg
gaattgtttggctacgaaagaggcgcgttcaccggggctcaccataaaggcagcattggg
ctgatccgcaaggcagacaaaggcacgctgtttctcgacgagatcggcgacatgccgctg
ccggttcaggcgcgtctgctgcgggtgttgcaggagcggtgcgtgcagccggtgggcagc
agcgagttgtacccggtggatatccgggtgatttccgcgacgcactgctcattgcgcgaa
catgtgcagaacggacgatttcgtcaggatttgtactaccgcatcagcggcctgaacctg
gaattgccgccgttgcgtgatcgcagcgacaagcccgcgttggtgcgtgccatctgggaa
cagcaccgcgaaccgcagcagacagcgggctttgagacccaggtaatggagttgttcgag
cggcacccctggccggggaacctgcggcagttgagtaacgtgattcaggtggcgttggcg
ctggcggacgaccagccgatttctaccgagcatctgccggaagactttttcgcggacctg
gcgatgggttgtgaacgcgtcgagcccgagacagtgctcaaccgcaaggccgcgctggac
acaccggaagagctgagtgagttgttgcaggcggcgggcgggaacatctcgcagttggcg
aagcgactgggggtgagccggaatacgctgtacaagcggctgcgggagcaggggttctga
DBGET
integrated database retrieval system
