Pseudomonas graminis: FX982_02971
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Entry
FX982_02971 CDS
T06934
Name
(GenBank) HTH-type transcriptional regulator GltC
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
pgg
Pseudomonas graminis
Brite
KEGG Orthology (KO) [BR:
pgg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgg03000
]
FX982_02971
Transcription factors [BR:
pgg03000
]
Prokaryotic type
Helix-turn-helix
LysR family
FX982_02971
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like
HTH_20
Motif
Other DBs
NCBI-ProteinID:
QKF51996
UniProt:
A0A6M8MJC7
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Position
3332623..3333546
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AA seq
307 aa
AA seq
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MNVKQLRAFLAVAQCLSFAQAGERLHVSQPALSLTIKALEEDLGGQLLTRTTRNVSLTPE
GEALLPLARQLLADWDNTEELLRQRFTLQMGKVSVAAMPSYAGNSLPIALKIFRERYPRV
NVAVHDVINEQVVEMVGHRRVELGIGFEPEAGNNLIFTPFYMDRFVAVVPKDSPLAERRE
MSWDELLRHDFITLQRPSAVRLLLEQDLQSQHGKLSVAFESHQLSTVGRMVANGLGVSAV
PSLCIAQMEELGARCIALEGPRIERRIGLMTQADHQLSAAAQGLREVLIECARDSNAAFA
SKLAPTG
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtgaaacagcttcgcgcgtttctggcagtggcgcagtgcttgagtttcgctcag
gccggcgaacggctgcatgtgtcgcaaccagcattaagcctgaccattaaggcgctggag
gaagacctgggcgggcagttgctgacccgtaccacgcgcaatgtcagcctgacgcccgag
ggcgaggccttgctgccgctggcccggcagttgctcgccgactgggacaacaccgaagag
ctgctgcgacagcgtttcaccctgcagatgggcaaagtgtcggtggccgccatgccgtcc
tacgcgggcaattcgctgccgatcgcgctgaagatttttcgcgagcgctaccctcgggta
aacgtcgcggtgcacgacgtgatcaacgagcaggtggtggaaatggtcgggcataggcgc
gtcgagctgggcatcggctttgagcccgaagcgggcaacaacctgatcttcacgccgttt
tacatggatcgttttgtagcggtggtgccgaaggattcgccactggccgaacgccgcgaa
atgagttgggacgagctgctgcgtcacgacttcatcaccctgcaacgcccgtccgccgtg
cgcttgctgctggagcaggacctgcaaagccagcacggcaaactctcggtggcgtttgaa
agccatcagctgtcgacggtcggacgcatggtcgccaatggcctgggcgtcagcgcggtg
ccgtcgctgtgcatcgcgcagatggaagaactcggcgcccgctgcatcgcattggaaggc
ccgcgcatcgagcgtcgtattggcttgatgacccaggcggaccaccagttgtcggcagcc
gctcaggggttacgcgaggttctgatcgaatgcgcgcgtgactcaaatgcggccttcgcg
agcaagctcgcacccacaggatga
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