Pseudomonas graminis: FX982_03450
Help
Entry
FX982_03450 CDS
T06934
Name
(GenBank) UvrABC system protein B
KO
K03702
excinuclease ABC subunit B
Organism
pgg
Pseudomonas graminis
Pathway
pgg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pgg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FX982_03450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgg03400
]
FX982_03450
DNA repair and recombination proteins [BR:
pgg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FX982_03450
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FX982_03450
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_22
AAA_30
HAMP
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
QKF52465
UniProt:
A0A6M8MVE7
LinkDB
All DBs
Position
3835910..3837925
Genome browser
AA seq
671 aa
AA seq
DB search
MSEFQLVTRFEPAGDQPEAIRQLVEGIDAGLSHQTLLGVTGSGKTFSIANVIQQVQRPTL
VLAPNKTLAAQLYGEFKAFFPNNSVEYFVSYYDYYQPEAYVPSSDTFIEKDASINDHIEQ
MRLSATKALLERKDSIIVTTVSCIYGLGSPETYLRMVLHVDRGDKLDQRALLRRLADLQY
TRNDMDFARATFRVRGDVIDIFPAESDLEAIRIELFDDEVESLSAFDPLTGEVIRKLPRF
TFYPKSHYVTPRETLLEAMEGIKAELNERLEYLRGANKLVEAQRLEQRTRFDLEMILELG
YCNGIENYSRYLSGRPSGAPPPTLYDYLPADALLVIDESHVSVPQVGAMYKGDRSRKETL
VEYGFRLPSALDNRPMRFDEWENVSPQTIFVSATPGNYEAEHAGRVVEQVVRPTGLVDPQ
IEIRPALTQVDDLLSEIHKRVAIEERVLVTTLTKRMSEDLTDYLADHGVRVRYLHSDIDT
VERVEIIRDLRLGTFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNLNGRAILYADRITGSMERAIEETDRRREKQIAFNLANGITPKSVIKDVADIMEGATV
PGSRSKKRKGMAKAAEENAKYEAELRSPSEITKRIRQLEEKMYQLARDLEFEAAAQMRDE
IGKLRERLLAV
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagtttcagctcgttacccgttttgagccggccggcgatcaaccggaggcgatt
cgtcagttggttgaaggcatcgacgccggcctgtcgcaccagaccctgctcggtgtaacc
ggttcgggcaagaccttcagcatcgccaacgtcattcagcaagtgcagcgcccgaccctg
gtgctggcgccgaacaaaaccctggccgcgcagctatacggcgagttcaaggcgtttttc
ccgaacaactcggtcgaatatttcgtttcctactacgactactaccagcccgaagcctac
gtgccgtcatcggacaccttcatcgagaaggatgcgtcgatcaacgatcacatcgaacag
atgcgcctgtccgcgaccaaagcgttgctggagcgcaaagactcgatcatcgtcaccacg
gtgtcgtgcatctacggtctgggcagcccggaaacctacctgcgcatggttttgcacgtg
gaccgcggcgacaagctcgatcagcgcgccttgctgcgccggctggccgacctgcaatac
acccgcaacgacatggattttgcccgggcgaccttccgtgtccgtggcgacgtgattgac
atcttccccgctgaatcggacctggaagccattcgcatcgagctgttcgatgacgaagtc
gagagcctttcggcgttcgacccgctgaccggcgaggtcattcgcaaactgccgcgcttc
acgttctacccgaagagccactatgtgaccccgcgggaaacgctcctggaggcaatggaa
ggcatcaaagccgagctgaacgagcgcctggaatacctgcgcggcgccaacaagctggtg
gaagcgcagcgtctggagcagcgcacccgtttcgacctggagatgatcctcgaactgggt
tactgcaacggcatcgaaaactactcgcgttatctgtccgggcgtccgtccggcgcgccg
ccgccgacgctgtacgactacctgccggctgacgcgctgctggtgatcgatgagtcccac
gtcagcgtgccccaagtcggcgccatgtataagggcgaccgttcgcgcaaggagacgctg
gtggaatacggtttccgcctgccgtcggcgctggacaaccggccgatgcgtttcgatgag
tgggaaaacgtcagcccgcagaccattttcgtctcagcgacgccgggtaactacgaagct
gaacacgcgggtcgtgtggtcgagcaggtggtgcggccgaccgggctggtggacccgcag
atcgaaatccgtccggcgctgacccaggtcgacgacttgctctccgagatccacaagcgc
gtggcgatcgaggagcgggtgttggtgaccacgctgaccaagcgcatgtccgaagacctc
accgattatctggctgaccatggcgtgcgggtgcgttacctgcactcggacatcgacacc
gttgagcgcgtcgagatcatccgcgacctgcgcctgggcacttttgacgtactggtgggg
atcaacctgctgcgcgaaggtctggatatgccggaagtgtcgctggtggcgattctcgat
gccgacaaggaaggcttcctgcgttccgagcgctcgctgatccagaccattggccgcgct
gcgcgtaacctcaacggccgggcgattctgtacgccgaccgcatcaccggctccatggaa
cgcgcgatcgaagaaaccgaccgtcgtcgcgagaagcagatcgcgttcaacctggccaat
ggcatcacgccgaaaagcgtgatcaaggacgtcgccgacatcatggagggcgccactgtg
cccggctctcgcagcaagaagcgcaaaggcatggccaaagctgccgaggagaacgccaag
tacgaagccgaactgcgctcgccgagtgaaatcaccaaacgcattcgtcaattggaagag
aagatgtaccaattggcgcgtgacctggagttcgaagcggcggcacagatgcgggatgag
atcggcaagctgcgggagcgtttgttggcggtttga
DBGET
integrated database retrieval system
