Pseudomonas graminis: FX982_04172
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Entry
FX982_04172 CDS
T06934
Name
(GenBank) hypothetical protein
KO
K11900
type VI secretion system protein ImpC
Organism
pgg
Pseudomonas graminis
Pathway
pgg02025
Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:
pgg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
FX982_04172
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pgg02044
]
FX982_04172
Secretion system [BR:
pgg02044
]
Type VI secretion system
Imp/Vas secretion system core components
FX982_04172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VipB
Motif
Other DBs
NCBI-ProteinID:
QKF53180
UniProt:
A0A6M8MQA1
LinkDB
All DBs
Position
complement(4647789..4648565)
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AA seq
258 aa
AA seq
DB search
MSSKHSSAVSGGGTVLSEESPGVYNTLFSKINLNPVSALGDIEAFQNNEALSEISADERV
TAAVSVFLNLLKGSSRKVQRLDKTLLDEHIASLDAQISRQLDAVMHHPDFQRVESTWRGV
KSLIDQTDFRQNVRIELLDISKDHLVQDFEDAPEIAQSGLYMHTYTQEYDTPGGEPIAAA
VSSYEFDRSPQDIALLRNISKVAAAAHMPFIGSVGPAFFGKETMEEVAAIKDIGNYFDRA
EYIKWKSFRDTDDSLISG
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcgaagcactcttccgcagtctcaggcggtggcaccgttttgtccgaagaaagc
cccggcgtgtataacacgctgttttcaaaaattaacctcaacccggtttcagcgttgggc
gatatcgaggcgtttcagaacaacgaagcgctgtcggagatttccgccgatgagcgcgta
accgcagccgtcagcgtattcctcaacctcctcaaaggctcgtcgcgcaaggtccagcgc
ctcgacaagaccctgcttgacgaacacatcgcctcgctggacgcgcagatcagccgccag
ctcgacgccgtcatgcaccatccggactttcagcgggtggaatccacatggcgcggcgtt
aaatcgctgatcgaccagaccgatttccggcaaaacgtgcgcatcgagttgctggacatc
agcaaggaccatctggtccaggatttcgaagacgcccctgaaatcgctcaaagcggtctg
tacatgcacacctatacccaggagtacgacacgcctggcggtgaacccattgccgcagct
gtttccagttacgagtttgatcgcagcccgcaagatatcgcgctgcttcgcaacatatcg
aaagtcgcggcggcagcgcacatgccgttcattggttcggtagggccggcattcttcggc
aaggaaaccatggaagaagtcgctgccatcaaagacatcggcaattattttgatcgcgcc
gaatacatcaaatggaagtccttccgcgacaccgatgattcccttatatcgggttga
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