KEGG   Pseudomonas graminis: FX982_04462
Entry
FX982_04462       CDS       T06934                                 
Name
(GenBank) Toxin RTX-I translocation ATP-binding protein
  KO
K13409  ATP-binding cassette, subfamily B, bacterial CvaB/MchF/RaxB
Organism
pgg  Pseudomonas graminis
Pathway
pgg02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:pgg00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    FX982_04462
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:pgg01002]
    FX982_04462
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:pgg02000]
    FX982_04462
   02044 Secretion system [BR:pgg02044]
    FX982_04462
Peptidases and inhibitors [BR:pgg01002]
 Cysteine peptidases
  Family C39
   FX982_04462
Transporters [BR:pgg02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB-BAC subgroup
    FX982_04462
Secretion system [BR:pgg02044]
 Type I secretion system
  RaxAB-RaxC type I secretion system protein
   FX982_04462
SSDB
Motif
Pfam: ABC_membrane Peptidase_C39 ABC_tran SMC_N AAA_29 AAA_21 AAA_22 RsgA_GTPase T2SSE AAA_16 P-loop_TraG Peptidase_C39_2 nSTAND3 FtsK_SpoIIIE nSTAND1 AAA_25 cobW AAA_23
Other DBs
NCBI-ProteinID: QKF53469
UniProt: A0A6M8MFE4
LinkDB
Position
complement(5010135..5012240)
AA seq 701 aa
MSVYESLVFSAKKKVKIVYQSEISECGLACVTMISNYHGNCVQLNEMRGKYGSSNQGVSL
RHLIEVAAAEKLGSRALSVSLPELRKLSMPCILHWKFNHFVVLQSVTEKGAVICDPVKGV
ERLPIKLLSKSFTGVALELWPKLDFQRVSRRERLSLKHLKASFIGLGGSLTQILIISFVL
ELLMIISPLYFQWLIDHIILNNDNEFLPTLAGAFIFLLLIQQALKFAREWMVMYFSTLAG
VQWRSNVLDHLMRLPISFFQNRSLGDLISKFGSVNAIQQTLTSGFLVSILDGFMALVTIV
MMFYYSAGLALVSVAAASAHCALRFFWFAPLKTATAQHIACATRQETNLIESLRGIRTLK
AFGRQGDRHSSWVALYVRQVNAGTKSHRLNLCYQQATGLIGGLEHIIALWIGAEMVMAGF
FSIGVLTAYNSYRVQFGARLVSLIDKVLELCVMRLEVERLSDIVLSEPDSVQLSCAEPSG
FKFDLLELRDLSYRYDSSSPWILRNLNLTIKAGDFLAITGSSGSGKSTLLNILLGLLRPT
EGHVLLNGIDVTNGLSLQKISSCVFQDDVLFAGSLFENITFFDPSFDEEKVVDAAKFAAI
HEDIIKLPMGYQTLVGDMGVALSGGQRQRVMLARAFYKQPSILFLDEATSHLDIANEFLV
NEALSLSHITKVMVAHRPQAIAAANRVVILEEGAIKHNFKA
NT seq 2106 nt   +upstreamnt  +downstreamnt
atgagtgtctacgagagtttagtgtttagcgctaagaaaaaagttaaaatcgtttatcag
tctgaaatctccgagtgcggtttggcctgtgtaacaatgatcagtaattatcacggcaac
tgcgtgcagctcaatgaaatgcggggcaagtacggttcgtctaatcaaggcgtaagccta
cgacatttgatcgaggtagcagcagctgaaaaattaggaagtagggcactgagcgtttcg
cttcctgaattgaggaagcttagtatgccttgcattcttcactggaaattcaatcatttt
gtagtgctgcagtcagtgactgaaaagggcgcagtcatttgcgatcctgtcaaaggtgta
gagcgtctccccattaaattactgtcaaagagttttaccggtgttgcattagaactttgg
ccaaaactggacttccaaagagtaagtcgtcgcgaaaggctatctctgaaacacttaaag
gcgtctttcattggtcttggggggtctttaacgcaaatcctgataatatcttttgtgctt
gaattgctaatgatcataagtccattgtattttcagtggttgatagatcacattatacta
aataatgataatgagtttctgcccacccttgcgggtgcgttcatttttttgttattaata
caacaggctctcaagttcgcgcgcgagtggatggttatgtattttagtacgttggcggga
gttcaatggcgttctaacgtcctagatcatctaatgaggttaccgataagcttttttcaa
aatcgttcattgggtgatttaatatcaaaatttggaagtgtgaacgctattcagcaaact
ctgacctcgggatttttagtatcaattttggatggtttcatggcgcttgttactattgta
atgatgttttattacagcgccgggctcgcccttgtaagtgttgctgcagcgtcggcgcac
tgcgcgttgcgttttttctggtttgcacctttaaaaactgcgactgctcagcatattgca
tgcgcgacacgacaggaaactaacttgattgagtcattgcgcggaattagaacgctcaaa
gcatttggtcgacaaggtgatcgacactcatcgtgggttgccttatatgtgagacaggta
aacgctggtactaaatctcaccgtctgaacttgtgctaccagcaagctactggtcttata
ggtggtttagagcacattattgccttatggataggggccgagatggtaatggcgggtttt
ttttcaattggcgtattaactgcctacaattcatacagagttcagtttggtgcaagattg
gtaagcctgatcgataaagtgctggagctttgtgtgatgcgccttgaagtagagaggttg
tcagacatcgtgctgtcagagccagattcggttcaattatcctgcgcagaacctagcggg
tttaaatttgatctgcttgagctgcgtgacttgagttaccgttatgacagctcatcgcca
tggatattaagaaacttgaatctcaccattaaggctggcgattttttggccataaccggc
tcgtccggcagcggtaagagcacgcttcttaacattttgttgggcttgttgcggcccact
gaggggcatgtacttctcaatggcattgatgtcactaatgggctctcacttcaaaaaatc
tcttcctgcgtatttcaagatgacgtcttgttcgctggatcgctttttgaaaatattaca
tttttcgatccttcatttgatgaggagaaagtcgtagatgctgctaagtttgccgccatt
cacgaagatatcatcaagttgccgatggggtaccaaactcttgtaggcgacatgggagta
gctctatcaggcgggcagcgccagcgtgtaatgcttgcgcgagctttttataaacagccg
tcgattctttttttagatgaggcgacgagtcatttagatatagctaacgagttccttgtt
aatgaagctttaagcttgtcgcatataacgaaagttatggtggctcatcgaccgcaggca
atagcggcggctaaccgcgttgtgattctcgaagaaggtgccataaaacataactttaag
gcatag

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