Pseudomonas graminis: FX982_04668
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Entry
FX982_04668 CDS
T06934
Name
(GenBank) HTH-type transcriptional regulator CynR
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
pgg
Pseudomonas graminis
Brite
KEGG Orthology (KO) [BR:
pgg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgg03000
]
FX982_04668
Transcription factors [BR:
pgg03000
]
Prokaryotic type
Helix-turn-helix
LysR family
FX982_04668
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
PBP_like_2
Motif
Other DBs
NCBI-ProteinID:
QKF53675
UniProt:
A0A6M8MYZ2
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Position
5240039..5240932
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AA seq
297 aa
AA seq
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MKNSIQHIRAFLTVAHTGSFAKAALELNLSPSALTVQIQQLEEWLGVALLERSPRQVSLT
AAGQNNRGPMEKLLLDLDNIVSGSRDLAALRRGVVTIAALPSMCSGTLPPLLKTFREQFP
GVEVRLRDVVAQRIDSLVREGEVDFGLGVRARMGHGLTFEVVMVDRLSLFVPADHPLARE
RSITLQALAGQPIILTGRDSSVRERVEQLFAEEGLALTPGLEANYMSTVMALVRQGLGMT
LLPESADEGRGDLIQVRVEHPGVCREIGLITRAGVGLSPAAQRFVETMKNALSPQNL
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgaagaactcgattcagcacatccgcgcctttctcaccgtcgcccacaccggcagcttt
gccaaagcggcgctggagctgaacctgtcgccttccgccctgaccgtgcagatccagcag
ctggaagaatggctcggcgtcgccctgctggagcgcagcccgcgtcaggtcagcctgacc
gctgcgggccagaacaatcgcgggcccatggagaaactgctgctggacctggacaacatc
gtcagcggctctcgggatctggccgcgctgcgccggggcgtggtgaccatcgctgccctg
ccctcaatgtgttcaggcacgctaccgcctctacttaaaaccttccgcgagcagtttccc
ggcgtcgaagtgcgcctgcgggacgtagtggcgcagcggatcgattcgctggtgcgtgag
ggcgaagtggatttcgggctgggggtgcgggcgcgcatgggccacgggctgacgttcgag
gtggtgatggtcgaccggctgagtctgttcgtccccgctgatcatccgctggcacgggag
cgctcgatcaccctgcaggccctggccgggcagccgatcatccttaccggtcgcgacagc
agcgtgcgcgagcgggtggagcaactgtttgctgaagaaggactggcactgacgccgggg
ctggaagcgaactacatgtcgacggtcatggcgctggtgcggcaaggcctggggatgacg
ttgctgccggaatccgccgacgaaggccgcggcgatttgatacaggtgcgggtcgagcat
cctggggtgtgtcgggagatcggcctgattacccgagcgggtgtaggcctgagccccgcc
gcccagcgattcgtcgaaaccatgaaaaacgcgctgtcaccgcagaacctgtag
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