Pseudomonas graminis: FX982_04779
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Entry
FX982_04779 CDS
T06934
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
pgg
Pseudomonas graminis
Pathway
pgg02020
Two-component system
pgg02025
Biofilm formation - Pseudomonas aeruginosa
pgg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pgg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FX982_04779
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
FX982_04779
09142 Cell motility
02040 Flagellar assembly
FX982_04779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgg03021
]
FX982_04779
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pgg02035
]
FX982_04779
Transcription machinery [BR:
pgg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FX982_04779
Bacterial motility proteins [BR:
pgg02035
]
Flagellar system
Flagellar assembly proteins
Stator
FX982_04779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
HTH_30
GerE
Phage_terminase
Rv2175c_wHTH
Motif
Other DBs
NCBI-ProteinID:
QKF53786
UniProt:
A0A1I0J5R2
LinkDB
All DBs
Position
complement(5369103..5369846)
Genome browser
AA seq
247 aa
AA seq
DB search
MTASGYRMYSKSSKDSQYELIERYAPLVKRIAYHLLARLPASVQVEDLIQAGMIGLLEVS
TKYDSTKGASFETYAGIRIRGAMLDEVRKGDWAPRSVHRNTRMVSDAIRAIEAKTGRDAK
DHEVAAELEMSLDDYYGILNDTLGSRLFSFDDLLQDGEHEGLHEDGASQSLEPSRDLEDE
RFQAALAEAIANLPERERLVLSLYYDEELNLKEIGEVLGVSESRVSQLHSQCAARLRGRL
GEWRARS
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgacagcaagtggctatcgcatgtacagcaaatcgtccaaagactcccagtatgagctg
atcgagcgttatgccccgctggtcaaacgaatcgcctaccacttgctggcgcgtctgccg
gccagcgtgcaggtcgaggatttgatccaggcgggcatgattggcttgctcgaggtttcg
accaaatacgactccaccaaaggggccagcttcgagacgtacgcgggtattcgtatccgt
ggcgcgatgctcgacgaagtgcgcaagggggactgggcgccgcgctcggtccaccgcaat
acgcgcatggtcagtgacgcgattcgtgcaatcgaagcaaaaaccggccgtgacgctaaa
gatcacgaggttgctgccgaacttgaaatgagtctcgacgattattacgggattctgaac
gataccctgggcagccgcctgttcagtttcgacgacctgttgcaggacggcgaacacgaa
gggctgcacgaggacggcgcgagccagtccctggaaccgtcgcgggatctggaagacgag
cgcttccaggctgcgctggccgaggccattgccaacttgccggaacgtgaacgcctggtg
ttgtcgctgtactacgacgaagagctgaacctcaaggaaatcggtgaggttctgggggtc
agcgagtcgcgggtcagccagctgcacagtcaatgcgcggcgcggttgcgcggtcgcctt
ggcgagtggcgcgcacgttcctga
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integrated database retrieval system
