Photobacterium ganghwense: FH974_00085
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Entry
FH974_00085 CDS
T07175
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
pgh
Photobacterium ganghwense
Pathway
pgh00071
Fatty acid degradation
pgh00280
Valine, leucine and isoleucine degradation
pgh00310
Lysine degradation
pgh00362
Benzoate degradation
pgh00380
Tryptophan metabolism
pgh00410
beta-Alanine metabolism
pgh00640
Propanoate metabolism
pgh00650
Butanoate metabolism
pgh00907
Pinene, camphor and geraniol degradation
pgh00930
Caprolactam degradation
pgh01100
Metabolic pathways
pgh01110
Biosynthesis of secondary metabolites
pgh01120
Microbial metabolism in diverse environments
pgh01200
Carbon metabolism
pgh01212
Fatty acid metabolism
Module
pgh_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
pgh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
FH974_00085 (fadB)
00650 Butanoate metabolism
FH974_00085 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
FH974_00085 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
FH974_00085 (fadB)
00310 Lysine degradation
FH974_00085 (fadB)
00380 Tryptophan metabolism
FH974_00085 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
FH974_00085 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
FH974_00085 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
FH974_00085 (fadB)
00930 Caprolactam degradation
FH974_00085 (fadB)
Enzymes [BR:
pgh01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
FH974_00085 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
FH974_00085 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
FH974_00085 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
FH974_00085 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
QSV14126
LinkDB
All DBs
Position
1:complement(18821..20983)
Genome browser
AA seq
720 aa
AA seq
DB search
MIYQGETLSVSYLEDGIAELNFNAPGSVNKFDLKTLESLNEALNVLYHQTELKGLLLTSA
KSAFIVGADITEFLGLFAKPAEELSQWVTHANDIFNKLEDLPVPTLSAINGHALGGGCEC
VLSTDFRLADSTARVGLPEIKLGIMPGFGGTVRLPRLLGADSAMEIITAGKDKKALDALK
LGLVDGVVEPAQLRDAALAMLKEAIAGKLDWQHRRAQKKAPLALNKIEATMSFTMAKGMV
AQIAGPHYPAPMTAVKTIEEAARCSRDEALAIENKHFVTLAKTDVAKALVGIFLNDQYIK
GQAKQAAKAGKPAAKGMVLGAGIMGGGIAYQSALKGVPVIMKDIADPSLELGMGEAAKLL
NKQMERGYLDGLGMARVLSSITPTLHYAGAEDVDVVVEAVVENPKIKAAVLSEVEALVGD
DAVITSNTSTIPINQLAKSLKRPEKFCGMHFFNPVHRMPLVEIIRGEHTSEETINRVVAY
AAKMGKSPIVVNDCPGFFVNRVLFPYFAGFSLLLRDGADFTQIDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAEGFPDRMGKDFKDAVDVMYETQRFGQKNGKGFYAYTVDRKGKP
KKTVDADVARLLAPVVSGNVELDAEAIIARMMVPMINEVVRCLEEDIIASPAEADMALVY
GLGFPPFRGGVFRYLDTVGLANYVAMADRFAHLGALYEVPAGLREKAGKGETYYPVPTNA
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgatttaccaaggtgaaaccctatccgttagctatctggaagatggcatcgcggaactc
aacttcaatgcccctggcagtgtcaataaattcgacctgaaaaccctagagagcctgaac
gaagcactgaatgtcctgtatcaccaaaccgagctgaaaggactgctactgacatcggct
aaatccgctttcattgtcggcgctgacattaccgagttcctcggcctgtttgccaaaccg
gctgaagaattgtctcaatgggtgacccatgccaatgatatcttcaacaaattagaagac
ctgccggtgccgacactgtcggcgatcaatggtcatgctttgggtggtggctgcgaatgc
gtgctgtccaccgacttccgcctggcagacagcacggcccgcgttggcctgccggaaatc
aagctgggcatcatgcctggatttggcggcactgtccgactacctcgtctgttgggggcg
gactccgccatggaaatcattactgccggtaaagacaaaaaagccctggatgccctgaaa
ttgggcctggtggacggtgtggtcgaaccggcgcagctgcgtgatgcagcactggccatg
ctgaaagaggccattgccggtaagctggactggcaacaccgccgtgcccagaaaaaagcc
ccgctggcactgaacaagatcgaagccaccatgagctttaccatggccaaaggcatggtg
gcgcaaattgccggcccacactatccggcccccatgacagccgtcaaaaccatcgaagaa
gctgcccgctgcagccgtgatgaagcgctggctatcgaaaacaaacactttgtaaccctg
gcgaaaaccgacgtagccaaagcattggtcggcatcttcctgaacgaccagtacatcaaa
ggccaggccaaacaagcagccaaagccggtaaaccagcagctaaaggcatggtactgggt
gccggcatcatgggtggcggtattgcctaccagtcagcactgaaaggtgtgccggtaatc
atgaaagatattgctgacccgtcactggagctggggatgggagaagcggccaaactgctt
aacaagcagatggaacgcggctaccttgacggcctgggcatggcccgcgtcctgagcagc
atcacaccaaccctccactacgccggtgccgaagacgtagatgtggttgtggaagcggtc
gtggaaaacccgaaaatcaaagctgctgtattgagcgaagtggaagcgctggtcggtgac
gatgccgtgattacctcgaatacctctaccatcccgatcaaccaactggcgaaaagcctg
aagcgcccggaaaaattctgcggaatgcatttcttcaacccggttcaccgcatgccgctg
gttgaaattatccgtggcgagcacacatcggaagagaccattaaccgcgtcgtcgcgtat
gccgcgaagatgggtaaatccccgattgtggtcaacgactgcccggggttcttcgtcaac
cgtgtgctgttcccttactttgcgggtttcagcctgctgctgcgtgacggtgccgacttc
acgcaaatcgacaaagtgatggagaagcaattcggctggccgatgggcccggcttacctg
ctggatgtggtgggtatcgacaccgcgcaccatgcgcaagccgtcatggcagaagggttc
cctgatcgtatgggcaaagacttcaaagacgctgtggatgtaatgtacgaaacccagcgc
ttcggccagaaaaatggcaaaggcttctacgcctacacggttgaccgtaaaggcaagcct
aagaaaacagtggatgccgacgtggccaggctactggcaccggtggtcagtggcaatgtg
gagctggatgccgaggctatcatcgcccgcatgatggtaccgatgatcaacgaagtcgtt
cgctgtctggaagaagacattattgccagcccggcagaagccgatatggcgctggtatat
ggtcttggtttccctccgttccgcggcggtgtgttccgttacctggatactgtgggtctg
gcgaactacgtggcgatggcagatcgttttgctcatctgggtgccctgtatgaggtaccg
gctggcctgcgcgaaaaagcgggcaaaggtgaaacttactacccagtaccaaccaacgcg
tga
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