Photobacterium ganghwense: FH974_00495
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Entry
FH974_00495 CDS
T07175
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
pgh
Photobacterium ganghwense
Brite
KEGG Orthology (KO) [BR:
pgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgh03021
]
FH974_00495 (rpoH)
Transcription machinery [BR:
pgh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FH974_00495 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
2Fe-2S_thioredx
HTH_10
KORA
HTH_25
Motif
Other DBs
NCBI-ProteinID:
QSV14190
LinkDB
All DBs
Position
1:104080..104940
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AA seq
286 aa
AA seq
DB search
MTQEMTSMALVSADSLESYVQSVNSYPMLTAEQERELAERLHFDGDLNAAKALVMSHLRF
VVHIARGYSGYGLPMADLVQEGNVGLMKAVKRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKAKKRLGWFNNEEVNMVAEQLGVDASEVREMESRLAAQDA
AFEMPTEDDDRDTAYSAPVYYLEDKSSDLARSFEDNNWEAHANNRLSTALASLDERSQHI
VRARWLDDNKATLQELAEHYGVSAERIRQLEKNAMRKLKEAVGEFA
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgacacaagagatgacatcaatggctctggtttctgcagatagtctggaaagttacgtc
cagagcgtcaacagctatccaatgctgacggctgagcaggagcgtgagttagctgagcgt
cttcactttgatggtgaccttaacgccgcgaaggcgttagttatgtcgcatctgcgtttt
gttgttcatattgcgcgtggctactcaggctatggcctgccaatggcggatctggttcag
gaaggcaacgtcggcctgatgaaggctgtaaaacgtttcaacccggaagtgggtgtgcgt
ctggtgtcgtttgccgtgcactggatcaaagcggaaatccacgaatatgtgctgcgtaac
tggcgtattgttaaagtcgccaccaccaaggcgcagcgcaagctgttcttcaacctgcgc
aaggcgaaaaagcgcctgggctggttcaataatgaagaagtgaacatggttgctgagcag
ctgggggttgacgccagcgaagttcgtgagatggaatcccgccttgccgctcaggatgca
gcgtttgaaatgccaaccgaagatgacgatcgcgatacggcctacagtgcgccggtttac
tacctggaagacaagtcttcagatctggctcgcagctttgaagacaacaactgggaagcg
catgcgaacaatcgtctgtcgacggccctggcgagcctggatgagcgcagccagcacatt
gtccgtgcccgttggctggatgataacaaagcgactctgcaggaactggctgagcattac
ggcgtttctgccgagcggatccgccagctggaaaaaaatgcgatgcggaaactgaaagaa
gccgtgggcgaatttgcctga
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