Photobacterium ganghwense: FH974_00825
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Entry
FH974_00825 CDS
T07175
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
pgh
Photobacterium ganghwense
Pathway
pgh00541
Biosynthesis of various nucleotide sugars
pgh01100
Metabolic pathways
pgh01250
Biosynthesis of nucleotide sugars
Module
pgh_M00064
ADP-L-glycero-D-manno-heptose biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
pgh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FH974_00825 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pgh01005
]
FH974_00825 (rfaD)
Enzymes [BR:
pgh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
FH974_00825 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
pgh01005
]
Core region
FH974_00825 (rfaD)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
KR
NAD_binding_10
adh_short
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
QSV14249
LinkDB
All DBs
Position
1:complement(172362..173306)
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AA seq
314 aa
AA seq
DB search
MIIVTGGAGMIGSNIVKTLNEQGHNDILVVDNLKDGTKFANLVDLDIADYMDKEDFITQI
MAGDDFGPIEAVFHQGACSSTTEWDGKYMMLNNYEYSKELLHYCLERQIPFLYASSAATY
GGRDHDFIEERAYEGALNVYGYSKQLFDNYVRRLWQDAEANGESLSQITGFRYFNVYGPR
EQHKGSMASVAFHLNTQIHQGDNPKLFEGSEHLKRDFVYVGDVCKVNLWFWQQGVSGIYN
CGTGKAESFNEVAKAVIAFHGKGQVEEIPFPDHLKGRYQAFTQADLTKLRAAGYKEEFKS
VAEGVAEYMAIINS
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgattattgtaactggcggcgccggtatgatcggcagcaacatagtgaaaaccctgaac
gagcaaggccataacgacattcttgttgtggacaatctcaaagacgggaccaaatttgcc
aacctggtcgaccttgatatcgccgactacatggacaaggaagatttcatcacgcaaatc
atggccggtgatgactttggccctattgaggcggtcttccatcagggtgcctgctcatcc
accactgagtgggacggcaagtacatgatgctcaataactacgagtattcgaaagagctg
ctgcactactgcctggagcgccagattcctttcctgtatgcctcgtccgcagcgacctac
ggcggccgcgaccatgactttattgaagagcgcgcctacgaaggggcgctcaatgtctat
ggctactccaagcagctgtttgacaattacgtccgtcgcttgtggcaggatgcagaagca
aacggcgaatcgctgtcgcaaattaccggctttcgttacttcaatgtctacggcccccgc
gagcagcacaagggcagtatggcctccgtcgccttccacctgaatacacaaatccaccaa
ggtgataatccgaagctgtttgaaggctcagagcaccttaaacgtgattttgtgtatgtc
ggtgatgtgtgcaaggtgaacctctggttctggcagcaaggcgtttccggcatctataac
tgcggcaccggcaaagcggagtctttcaacgaagtcgctaaagccgtcatcgcgttccac
ggcaagggccaggtggaagaaattccgtttccggatcacctgaaaggccgttatcaggcc
ttcacccaggcagatctgaccaagttacgcgcagccggttacaaggaagaattcaaatcg
gtggccgagggcgtggccgaatacatggcaatcatcaacagttaa
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