Photobacterium ganghwense: FH974_02055
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Entry
FH974_02055 CDS
T07175
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pgh
Photobacterium ganghwense
Pathway
pgh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FH974_02055 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgh03019
]
FH974_02055 (pcnB)
Enzymes [BR:
pgh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
FH974_02055 (pcnB)
Messenger RNA biogenesis [BR:
pgh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
FH974_02055 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Gad2
ATP-cone
Ferritin
Motif
Other DBs
NCBI-ProteinID:
QSV14479
LinkDB
All DBs
Position
1:complement(425259..426674)
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AA seq
471 aa
AA seq
DB search
MRCIIFNRVASFCRKVLNRDSSTLDTEELALQVYQRQEHGISRKDISENALKVLYRLNKA
GYDAYLVGGGVRDLLLGKQPKDFDIATNATPEEIKQLFRNCRLIGRRFRLAHILFGRDVI
EVATFRGHHADTQPLNDKKQISAQSQEGMLLRDNVYGTIEEDAERRDFTINALYYNIQDF
TVADYAHGVEDLDNRVIRLIGDPETRYREDPVRMLRAVRFAAKLDMTIEPETAKPIKLLA
SLLQDIPAARLFEESLKLLQSGNGLATYKLLRQYNLFQQLFPLLAEHFTEDESSLTEKML
EHILAATDARIEEGKRVNPAFMYAAMLWYPAMTRAEEIAFASGLGYYDAFMVAANDILDE
QVKNIAIPRRFTTTIRDIWQQQMRLSRRTGKRAFKMMEHPKFRAAFDFLEMRGHFEGPEV
TELAQWWDEFQQGDRNQRNKMVQIINDGGSATTRRRRRRPVRRKKPQAKSS
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaggtgtattatctttaatcgagtcgccagcttttgccgtaaggtattgaatcgcgat
agtagtacgctcgacaccgaggaactcgctttgcaagtttatcagcgccaagagcacggt
atttcacgtaaagatatcagcgaaaatgcgctgaaagtcctttaccgcctaaacaaagcc
ggttacgacgcgtatctggtgggaggcggggttcgcgatctcctgttaggaaaacaaccc
aaagattttgacattgccaccaatgccactccggaagaaatcaagcagctgtttcgtaac
tgccgcctgattggccgtcgttttcgtctggcccacatcctgtttggccgcgatgtcatt
gaagtcgccacattccggggccaccacgctgacacccagccgctgaacgacaagaagcag
atctcggcgcaaagccaggaaggcatgctgctgcgtgataacgtctacggcaccatcgag
gaagacgccgagcgtcgtgacttcaccatcaacgccctgtattacaatattcaggacttc
accgtagcagactatgcccacggtgttgaagatctcgacaatcgcgtgatccgtctgatt
ggtgacccagaaacccgttaccgcgaagacccggtacggatgctgcgtgccgtacgtttc
gctgccaagctggatatgaccatcgagccggaaaccgccaagccgatcaagctgctggca
agcctgctccaggatattccggcggcccgcctgtttgaagaaagcctcaagctgcttcag
tccggcaatggtctggcaacttataagctgctgcgtcagtacaacctgttccagcaactc
tttccgttgctggcggagcactttaccgaagacgagagcagcctgaccgagaaaatgctt
gagcatattctggcagcaaccgacgcccgaatcgaggaaggcaagcgggtcaacccagcc
ttcatgtacgcagctatgctatggtacccggccatgacccgtgccgaggaaattgcattt
gctagcggcctgggctactacgacgccttcatggtggcggccaacgatattcttgacgag
caggtgaaaaacatcgcgattccgcgtcgtttcaccaccacgatccgggatatctggcag
caacagatgcgcttaagccgccgcactggcaaacgtgcgttcaagatgatggaacatccg
aaattccgcgcggctttcgacttcctggaaatgcgagggcatttcgaaggaccggaagtg
accgaactggcccaatggtgggacgagttccaacagggcgatcgcaaccaacgcaacaag
atggtgcagatcatcaacgatggcggaagtgcaacgacccgccgtcgccgtcgtcgtccg
gtgcgccgtaagaaaccacaggccaaatcgtcatga
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