Photobacterium ganghwense: FH974_02575
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Entry
FH974_02575 CDS
T07175
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pgh
Photobacterium ganghwense
Brite
KEGG Orthology (KO) [BR:
pgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgh03016
]
FH974_02575 (truD)
Enzymes [BR:
pgh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
FH974_02575 (truD)
Transfer RNA biogenesis [BR:
pgh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FH974_02575 (truD)
Prokaryotic type
FH974_02575 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QSV14562
LinkDB
All DBs
Position
1:519110..520195
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AA seq
361 aa
AA seq
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MSGIMDNFSWLYGKPSCQGRIKVEPEDFIVNENLGFDFAGHGEHFMVKIRKTGENTKYVV
NELAKACGVKSRDVSWAGLKDRHAVTEQWLSVHLPGKPDPDLTQFVAEHPGVEVLETARH
DKKLRPGDLSGNWFQLRLRDLDQPEAVLERLTHIAAHGVPNYFGEQRFGHSGNNVVKARA
WGNDEFRVRDKSKRSFYLSAARSWLFNMILSARIEQKLVHTVMAGDWLQPGSDAGLESGM
TGHLVEDVAAAQQAVDDSSWLLTAPMMGDNALPTTGEAEAFEMALVEQEPLLLKLIRDNR
MRHERRPLLLKPTDMAWAQEGDQVTVSFSLPAGCFATAVVRELMLEPELEDKENNNENSD
Q
NT seq
1086 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtattatggacaacttcagctggctttacggtaaacccagctgtcagggtcgg
atcaaagttgaacctgaagactttatcgtaaacgaaaatcttggctttgatttcgctggt
cacggcgagcacttcatggtgaaaatccgtaaaaccggtgagaacaccaaatatgttgtg
aacgaactggcaaaagcgtgcggcgtgaagtcgcgcgatgtcagctgggcgggcctgaaa
gatcgccatgccgtaacggagcaatggctgagtgttcacctgccgggcaagccggatccg
gatctgactcagtttgtggctgagcacccgggagtcgaagtgctggaaacggcccgccat
gataagaaactgcgtccaggcgatctgagcggcaactggttccagttacgcctgcgcgat
ttggatcagccagaggcggtgctggagcgactgacgcacattgctgctcacggggttccc
aactattttggcgagcagcgctttggtcatagcggcaataacgtggttaaagcccgtgcc
tggggtaacgatgagttccgggtacgcgataaaagtaagcgcagtttctacctgtctgca
gcacgctcctggctgttcaacatgattctgtcggcgcgtattgaacagaaactggtacat
actgttatggcaggcgactggctacagccgggctctgatgccgggctggaaagcggtatg
acgggtcacttagtggaagatgtggccgctgcgcagcaggctgttgatgacagcagttgg
ctgctgaccgccccaatgatgggagataatgccctgccgacaacaggcgaggctgaagcg
tttgaaatggcgctggtcgaacaggaaccactgctgctgaaactgattcgggataaccgg
atgcgccatgagcgtcgcccattgttgctgaagccaacggatatggcttgggcgcaggaa
ggcgatcaggtgacagtctcattctctctgcctgccggctgctttgccacggcggttgtc
cgggaattgatgctggagccggagctggaggacaaggaaaataacaatgagaattctgat
cagtaa
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