Photobacterium ganghwense: FH974_03350
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Entry
FH974_03350 CDS
T07175
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
pgh
Photobacterium ganghwense
Brite
KEGG Orthology (KO) [BR:
pgh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pgh01011
]
FH974_03350
Enzymes [BR:
pgh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
FH974_03350
Peptidoglycan biosynthesis and degradation proteins [BR:
pgh01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
FH974_03350
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM_RLK
LysM_OapA
LysM1_NFP_LYK
NMB0315_dom_I
LysM3_NFP
LysM2_CERK1_LYK3_4_5
Sda
Motif
Other DBs
NCBI-ProteinID:
QSV14682
LinkDB
All DBs
Position
1:complement(680931..682493)
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AA seq
520 aa
AA seq
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MKSRIFLASALLLAGCQITKTTDTVEETTNTTPLNPSAAQVATKPTTKATPQNVPPVVTV
TPQEQDDVWKRISMQMSLEIPENQRVNYYRNWYRRYPGHLQVVAQRAEPFLYLITEEIEK
RNLPLELALLPIVESSFDQFAYSHGHAAGLWQITQPTGRTFGLKQDWWYDGRRDVVESTR
AALDLLTYLNRKFDGNWLHALAAYNTGEGRVFRAISQNQAAGKPTDFWSLNLPEETSGYV
PKLLAVADVIRNHEKYGLDIPVIANKPAVKLVKPGTQMDLAMAASFAGVNVETLQSLNPG
YNHWATAPDGPSHLLLPINKVDGFNTAFAKNGRRGMKVIRYQVKSGDSLSALAKKHRTTT
KQIQRANNMTGTNIRVGRHLLIPVASQGPDAPAVSLVRKNQVTHENGYRTSYTVRSGDSL
WSIARSNNVSVKDIQKWNDITQRKPLRIGQKLTLWKDKDTSNALRTVYYEVQSGDNLSTI
AKRYNVKVADVVKWNQIGSQKYLKPGQKLKLYIDVTKVSA
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcccgaatttttttggcaagtgcgctattactggctggttgccaaattactaaa
acgacagatacagtagaagaaacgacaaacacaaccccccttaacccgtctgcggcccag
gttgctaccaaaccaacaacaaaggcaacgccgcagaatgtcccgccagtcgtgaccgtg
acaccgcaggaacaagacgatgtctggaagcggatcagtatgcagatgtctctcgagata
cctgaaaaccaacgcgttaattactaccgcaactggtaccgccgctacccgggtcacctt
caagttgtcgcacaacgtgccgagcccttcctgtacctgatcaccgaagaaattgaaaaa
cgtaacctccctctggaactcgcgttactccctatcgtagaaagctctttcgatcagttt
gcctactcacacgggcatgcggccgggctgtggcagatcactcagccgacaggacgcacc
ttcggactaaaacaggactggtggtatgacggccgccgtgacgtggtggaatcaacccgt
gcggctctggacttactgacgtacctaaaccgcaaattcgatgggaactggcttcatgct
ctggcagcctacaatactggcgaaggccgggttttccgagccatcagccaaaaccaagct
gcaggcaagcctacggatttctggtcgctgaatctgcctgaagaaaccagtggctacgta
ccgaaactgctggctgtcgccgatgtgatccgtaatcacgaaaaatacggtctcgacatt
ccggtaatcgctaataaaccggcggtgaaactggtaaaacctggcactcagatggacttg
gcgatggcggcatcctttgccggtgtcaatgtagaaacactgcaaagccttaatcccggc
tacaaccactgggcaaccgctccagatggcccaagtcacctcctgcttccgattaataag
gttgatggattcaacaccgcatttgccaaaaatggtcgtcgtggcatgaaggtcattcgt
taccaggttaaatccggtgacagcctaagtgcgctcgccaaaaaacaccggaccacgact
aaacagattcaacgtgccaacaatatgaccggtaccaatatccgggttggtcgccaccta
ctaattccggttgcctcgcaggggccggacgctccggcggtaagtctggtccggaaaaac
caggtgacccacgaaaacggctatcgcaccagctacaccgtccgttctggtgacagcctg
tggagcattgcacgcagcaataatgtctcggtgaaagatatccagaaatggaatgatatt
acccagcgcaaaccgctgcgtatcggacaaaagctcaccttgtggaaagacaaagacacc
agcaatgctttgcgaaccgtctattatgaagtgcagtctggcgataacctgagcaccatt
gctaaacgctacaatgtgaaagtggctgatgtggtgaaatggaatcaaatcggcagtcaa
aaatacctgaagccgggacaaaaactgaaactgtacattgatgtcactaaggtaagcgca
tga
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