Photobacterium ganghwense: FH974_04045
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Entry
FH974_04045 CDS
T07175
Name
(GenBank) Sapep family Mn(2+)-dependent dipeptidase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
pgh
Photobacterium ganghwense
Pathway
pgh00300
Lysine biosynthesis
pgh01100
Metabolic pathways
pgh01120
Microbial metabolism in diverse environments
pgh01230
Biosynthesis of amino acids
Module
pgh_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pgh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FH974_04045
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pgh01002
]
FH974_04045
Enzymes [BR:
pgh01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
FH974_04045
Peptidases and inhibitors [BR:
pgh01002
]
Metallo peptidases
Family M20
FH974_04045
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
QSV14785
LinkDB
All DBs
Position
1:809224..810594
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AA seq
456 aa
AA seq
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MKAKIATTKIATAIDAMRDDYLAAVKRLVAIPSVWQEDDSGTPFGQPIDDCLDATLALCR
EMGFLTFKDPAGYYGYAEIGSGEQMIGVLGHLDVVPTGERSAWQSDPFSPEVRDGRLYGR
GTQDDKGPTLAALFAVKALLDSGVQLEKRVRFIFGTDEETLWRCIDRYLAKEEVPQCGFT
PDSAFPLIHAEKMLIQAWLHGPGDPLIELACDGALNAVPELARYEGPLWEELAAKLDELG
YDFTAEDAEVVVFGKAAHSASADTKGVNAIARLCLALRQLGETHPAVKLIAEQIGEDANA
REIFGPVEDVSGRLTCNVAKLTITPEHSRIGLDIRVPVTFSKADYDTDIQAVAEQYGLRY
EEFDVLPSLYMPADSPVITALMDAYQAVSGDMDSLPMTSGGATYARAIPNCVAYGAIFPG
RDKVEHMPDEYLIIDDMMQAMKVYAEAIYRLQGVAL
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaaagccaaaatagcgacaacaaaaatagcgactgccattgatgcaatgcgtgacgat
tacctggctgcggtgaaacgcctggtggccattccgagtgtctggcaggaagatgacagc
gggacacctttcggacaaccgattgatgattgtctggatgccactctggcactgtgccgg
gaaatggggttcctcaccttcaaggatccggctggttattacggctatgccgaaattggc
agtggtgagcagatgattggggttctggggcaccttgatgttgtaccaaccggtgagcgt
tcggcctggcaatcagacccgttcagcccggaagtgcgcgacggccgtctatacggtcgc
ggcacgcaggacgacaaagggccgacgctggccgcactgtttgcggtcaaagccttgctg
gacagcggggtacagctcgaaaaacgggtacgttttattttcggaacggacgaagaaacc
ctgtggcgctgcattgatcgttatctggccaaggaagaagtgccgcagtgcgggttcacc
ccggactctgcctttccgctgattcacgcggaaaaaatgctgattcaggcttggttacat
gggccgggtgatccgctgattgaactggcctgtgacggggcgctgaatgcggtgccggag
ctggcacgctatgaaggtccgctgtgggaagagttggccgccaagctcgatgaactgggg
tatgactttaccgcagaagatgccgaggtggtggtgttcggcaaggcggcgcattcggcc
tcggccgatactaagggagtcaatgccattgcccgcctgtgcctggcattgcgccagttg
ggtgaaacccatccggctgtgaagttgattgccgaacagattggtgaggatgctaatgcc
cgggaaatttttggcccggtggaggatgtcagcggtcggctgacctgtaatgtggccaag
ctgacaattacaccagagcacagccgtatcggattggatatccgggttcccgtcactttc
agcaaagccgactatgatacggatatacaggccgttgccgaacagtatggcctgcgatac
gaagagtttgatgtgctgccctctctgtatatgcctgctgacagcccggtaatcactgcc
ctgatggatgcgtatcaggccgtgagcggtgatatggacagcttgccgatgacgtccggc
ggtgcgacgtatgcccgggcgattccgaattgtgtcgcgtacggggcgattttcccgggg
cgtgacaaggtagagcacatgcctgatgagtacctgatcattgatgacatgatgcaggcc
atgaaggtgtatgccgaggcaatctatcgtttgcagggagtggcgttatga
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