Photobacterium ganghwense: FH974_04565
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Entry
FH974_04565 CDS
T07175
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pgh
Photobacterium ganghwense
Pathway
pgh03030
DNA replication
pgh03430
Mismatch repair
pgh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FH974_04565 (dnaX)
03430 Mismatch repair
FH974_04565 (dnaX)
03440 Homologous recombination
FH974_04565 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgh03032
]
FH974_04565 (dnaX)
03400 DNA repair and recombination proteins [BR:
pgh03400
]
FH974_04565 (dnaX)
Enzymes [BR:
pgh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FH974_04565 (dnaX)
DNA replication proteins [BR:
pgh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FH974_04565 (dnaX)
DNA repair and recombination proteins [BR:
pgh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FH974_04565 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
RuvB_N
AAA_22
AAA_5
AAA_16
AAA_14
DNA_pol3_tau_4
AAA_2
AAA_18
TsaE
AAA_30
AAA_assoc_2
Mg_chelatase
AAA_19
nSTAND3
AAA_7
AAA_24
PIF1
TniB
Rad17
Cas_APE2256
Motif
Other DBs
NCBI-ProteinID:
QSV14876
LinkDB
All DBs
Position
1:926628..928949
Genome browser
AA seq
773 aa
AA seq
DB search
MSYQVLARKWRPHQFADVVGQSHVLTALENALAHNRLHHAYLFSGTRGVGKTTIARIFAK
GLNCEQGVTASPCGQCETCREIDEGRFVDLLEIDAASRTKVEDTRDLLDNVQYKPARGRY
KVYLIDEVHMLSRHSFNALLKTLEEPPEYVKFILATTDPQKLPVTILSRCLQFHLKHLDN
TQIQAQLEYVLTQEQVEFEPRALSLLARAAEGSMRDALSLTDQAIALGNGNVHATAVSEM
LGTLNTEQALYLLEAVAQGEAQPAMACLEELAGVGVEWDSLLRELASQLHRVAMYQALPA
SLDDSVPDAERIVLLSKAVSPQEVQLCYQIALQGRQDLAYAPDGRTGLEMVLLRMLAFRP
VAVSTVTPQTIAVPETQPATQPATPSVARTPSPMGQHPAGQTPAGQGQGMQRVQALRAQM
QTPAAQPMAQPAATPASVDTAAQRPMPATHHYENPPAYDAPPVPDYSESYGPESQHVDPS
VAYPQSPPSGQAALSQPVHNQQANNQPVHTQSAQPAAERPASAASGLLAARNKLRSQVKR
DGAAPASGKKTQPVQAKKVATVSVLDRIASKQNGRHAAAPDAMPVPGMPGGGSSSQAAPH
STAPQEYQWRPTAEPDESVVVTEVAPAQMKQALEHEKTPEMVNLLVNEAANQDSWSDWVT
KLNVGRMVQQLALNSAFERSGDAVTLTLRPSQKHLDTPKAREQLAQALSELFGAAISLTI
ELSDRGRTPLEWRECLYQEKLDQARQSLMADPNVNFICQRFAAVLDEDSVRPL
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttctggcacgtaaatggcgcccgcaccagtttgctgatgtggtgggt
cagtcccacgttttgacagcactggaaaatgcgcttgcccataaccgtttgcaccatgcc
tacttgttcagtggaacaagaggggtaggtaaaaccacgatcgcccgtatttttgcgaaa
ggcctgaactgtgagcagggtgtcacggcttcaccgtgtgggcagtgtgagacttgtcgt
gaaatcgatgagggacgctttgtcgatctgttagagatcgatgccgcctcacgcaccaag
gttgaagatactcgagatctgctggataacgtgcaatacaagccagctcggggacggtac
aaggtttacctgattgacgaagtgcacatgctctctcgtcacagctttaacgccttactg
aaaacactcgaagagccgccggaatacgttaaattcattctggcgaccacagatccgcaa
aagctgccggtgacgatcttgtcgcgctgtctgcagtttcatctcaaacatctggataat
actcagattcaggcgcagcttgagtacgtacttacccaagagcaggttgaatttgaacct
cgcgcattaagtctgctggcccgtgcagctgaaggcagtatgcgtgatgcactgagcctg
accgatcaggccattgcactggggaacggcaatgttcacgcgactgcggtgtcggaaatg
ctgggcaccctgaacacggaacaagctctgtatttgctggaagcggttgcccaaggggaa
gcgcagccagccatggcttgcctggaagaactggcgggtgtcggcgttgagtgggacagc
ctgctgcgtgagctggcttcccagcttcaccgcgttgccatgtaccaggcattaccggca
tcgcttgatgattctgtaccggatgccgagcgtattgtgctgctcagtaaagcggtatcg
ccgcaggaagtgcagctgtgctatcaaattgcgttgcaagggcgacaggatctggcttac
gcgccggatggccgtaccggtctggaaatggtgttgttacgcatgctggcgttccgtcct
gttgcagtgtcaacggtgacgcctcagacgattgctgttcctgagacgcaaccagcaacg
caaccggcgactccatcggtcgcacgaacgccaagtcctatggggcaacatcccgcgggc
caaacgcctgccggacaaggccaggggatgcagcgcgtacaggccctgagagcgcagatg
cagacaccagctgctcagccaatggctcagccggcggcgacgcctgcttcggtggacacg
gcggcgcaaaggccgatgcctgcgactcaccactatgagaatccgccagcttacgacgcg
ccgccagtgcctgattactctgagtcatacggtccggagtctcagcatgtggatccgagt
gtggcgtatccgcaatcgccaccgtctggtcaggctgcgctcagccagcccgtgcataat
cagcaagcgaataatcagccagtgcacactcagtcagcgcaaccggcggcagagcgtccg
gcttcggcagcttctggtctgttggcggcaaggaacaaattacggagtcaggtgaagcgt
gatggcgcggcaccggccagcggaaaaaagacccaaccggtacaggctaaaaaagtcgcg
accgtcagcgttctcgatcgaattgccagtaagcaaaacggtcgtcatgctgccgcacct
gatgcgatgccggtaccgggtatgccgggaggcggttcatcgtcacaagcggcaccgcac
tctaccgcaccgcaggaataccagtggcggccaacggcggagcctgatgagtctgttgtt
gtaaccgaagttgctcctgcccagatgaaacaggcgttggagcatgaaaaaacacctgaa
atggtgaatttgcttgtcaacgaagcggcaaatcaggatagttggtcggattgggtgact
aagcttaatgtaggtcgtatggttcaacagcttgccctgaactctgcgtttgagcgcagt
ggcgatgcggtaacactgacgctgcggccgagtcaaaagcacctggatacaccgaaagcg
cgtgagcaactggctcaggcactgagcgaattgtttggtgcggctatcagcctcaccatc
gaattaagtgataggggacgtacaccgctggaatggcgggagtgcctctatcaggaaaaa
ctggatcaagcccggcaaagcctgatggctgatcccaacgtgaatttcatttgtcagcgg
tttgctgctgtactggatgaagatagcgtaagacccttatag
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