Photobacterium ganghwense: FH974_04740
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Entry
FH974_04740 CDS
T07175
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
pgh
Photobacterium ganghwense
Pathway
pgh00020
Citrate cycle (TCA cycle)
pgh00640
Propanoate metabolism
pgh00660
C5-Branched dibasic acid metabolism
pgh00720
Other carbon fixation pathways
pgh01100
Metabolic pathways
pgh01110
Biosynthesis of secondary metabolites
pgh01120
Microbial metabolism in diverse environments
pgh01200
Carbon metabolism
Module
pgh_M00009
Citrate cycle (TCA cycle, Krebs cycle)
pgh_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
pgh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
FH974_04740 (sucD)
00640 Propanoate metabolism
FH974_04740 (sucD)
00660 C5-Branched dibasic acid metabolism
FH974_04740 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
FH974_04740 (sucD)
Enzymes [BR:
pgh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
FH974_04740 (sucD)
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Gene cluster
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Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QSV14909
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All DBs
Position
1:968794..969666
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AA seq
290 aa
AA seq
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MSILINKDTKVICQGFTGGQGTFHSEQALAYGTQMVGGVSPGKGGTTHLGLPVFNTVREA
VETTGATATVIYVPAPFCKDAILEAIDAGIKLIVTITEGIPTLDMLDVKVRLDEAGVRMI
GPNCPGVITPDECKIGIMPGHIHKAGKVGIVSRSGTLTYEAVKQTTDEGFGQSTCVGIGG
DPIPGSNFIDILAMFEKDPATEAIVMIGEIGGTAEEEAAAYIKEHVTKPVVSYIAGVTAP
PGKRMGHAGAIISGGKGTAEDKFQALEAAGVKTVKSLADIGKALREVTGW
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatcctaatcaacaaagacaccaaagtaatctgtcagggtttcaccggcggtcag
ggtacattccactctgagcaagcgcttgcgtacggtacgcaaatggttggtggtgtatct
ccgggtaaaggcggtacaacgcacctgggtctgccagtattcaacactgttcgtgaagct
gttgaaacaacaggcgcaacggcgacggttatctacgttccagcacctttctgtaaagat
gcgattctggaagcgatcgatgctggcatcaagctgatcgttaccatcactgaaggtatc
ccaacgctggatatgctggacgtgaaagtacgccttgatgaagctggcgttcgcatgatt
ggtccaaactgcccgggtgtgatcacaccggacgagtgtaagatcggtatcatgcctggt
cacatccacaaagcgggtaaagttggtatcgtttcacgttcaggtacgttgacgtacgaa
gcggttaagcaaacgactgacgaaggctttggccagtctacctgtgttggtatcggtggt
gacccaatcccgggttcaaacttcatcgatatcctggcgatgttcgagaaagatccagcg
acagaagccatcgtaatgatcggtgaaatcggtggtacagcggaagaagaagcggcagca
tacatcaaagagcatgtaactaagcctgttgtttcttacatcgcgggtgtaacagcccct
ccaggtaagcgcatgggtcacgcaggtgcaattatctctggcggtaaaggtactgcagaa
gataagttccaggcacttgaagcggctggcgttaaaacggttaagagcctggccgatatc
ggtaaggcgctgcgcgaagtaactggctggtaa
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