Photobacterium ganghwense: FH974_04870
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Entry
FH974_04870 CDS
T07175
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
pgh
Photobacterium ganghwense
Pathway
pgh00061
Fatty acid biosynthesis
pgh00071
Fatty acid degradation
pgh01100
Metabolic pathways
pgh01212
Fatty acid metabolism
pgh02024
Quorum sensing
pgh04146
Peroxisome
Module
pgh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
pgh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
FH974_04870 (fadD)
00071 Fatty acid degradation
FH974_04870 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
FH974_04870 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
FH974_04870 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
pgh01004
]
FH974_04870 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgh04147
]
FH974_04870 (fadD)
Enzymes [BR:
pgh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
FH974_04870 (fadD)
Lipid biosynthesis proteins [BR:
pgh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
FH974_04870 (fadD)
Exosome [BR:
pgh04147
]
Exosomal proteins
Exosomal proteins of breast milk
FH974_04870 (fadD)
Exosomal proteins of breast cancer cells
FH974_04870 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QSV14934
LinkDB
All DBs
Position
1:998073..999761
Genome browser
AA seq
562 aa
AA seq
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MDKVWLNRYPADVPAEINPDQYPSLVEMFEQSVQKYADQTAFINMGQVMTFRKLEERSRA
FAAYLQNELNLQKGDRVAVMMPNLLQYPIALFGILRAGCVVVNVNPLYTPRELEHQLNDS
GAKAIVIVSNFAHTLESIVKNTGVQHVVLTSLGDQLSRPKGTLVNFIVKYIKKMVPKYHL
PHATSMRMALRKGRRMQYVKPFMSGEDTAFLQYTGGTTGVAKGAILTHRNMLANVMQAKG
AYSPVLTEGRELIVTALPLYHVFALTVNCLLFIEMGGRNLMITNPRDIPTFVKELQRYPF
TAITGVNTLFNALVNNEDFHEIDFSNLRLSVGGGMAVQRAVAEKWKQITGNYLLEGYGLT
ECSPLVAAYPYDLVDYNGSIGLPVPSTEVRIVDDEGNVLGNDQTGELQVRGPQVMQGYWQ
RPEATKEVLSDDGWLSTGDIVRFDDEGFLHIVDRKKDMILVSGFNVYPNEIEDVVALNSK
VLEVAAIGQPHEVSGEVVKICVVKRDASLTREELLSHCREHLTGYKVPKIVEFRDELPKT
NVGKILRRALREESDKQVAQQA
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
gtggataaggtttggcttaaccgctatccggcagatgtaccggcagaaattaacccggat
cagtatccgtcgttagtcgaaatgtttgagcagtctgttcagaagtatgccgatcagact
gcgtttatcaacatgggtcaggtcatgaccttccgtaaattggaagagcgtagccgggca
tttgctgcctatctgcagaatgaactcaatctgcaaaaaggtgatcgcgtggcggtcatg
atgccaaacctgctgcagtacccgattgcactgttcggtattttacgtgctggttgtgtg
gtggtgaacgttaacccactgtacacgccgcgcgaacttgagcatcagttgaatgactcc
ggtgccaaagccattgttatcgtgtcaaacttcgcgcacacgcttgaaagtattgtgaaa
aataccggagtgcagcacgttgtactgaccagcctgggggatcagttgtcccgaccgaaa
gggacattggtgaacttcatcgtgaagtacatcaagaagatggtgcctaagtatcatttg
ccacacgcgacatctatgcgcatggcgctgcgcaaaggccgccgcatgcagtatgtgaag
ccatttatgtccggtgaagatacggcattcctgcaatataccggtggtaccaccggagtt
gcgaaaggggcgatactgactcaccgcaacatgctggcaaacgttatgcaggcgaaaggg
gcctatagcccggtcctgacggaaggccgcgagctgattgtgaccgcgttgccgctttat
cacgtgtttgcactgacggtgaactgcctgctgtttattgaaatgggcggacgtaacctg
atgatcaccaacccgcgtgacattccgacgtttgtgaaagaattgcagcgctacccgttc
acggcgattaccggcgtgaacaccttgtttaacgctttggtaaataacgaagatttccac
gaaatcgacttcagtaatctgcgcttgtcggtcggcggaggcatggctgtacagcgtgcc
gttgctgaaaaatggaagcagatcacaggcaattacttgctagaagggtatggtctgact
gagtgttcaccactggtggcggcttacccttatgatttggtcgactataatggctctatt
ggtctgccagtaccgtcaacagaagtacgtattgttgatgatgaaggcaatgtactgggt
aacgaccagacaggtgaactgcaggtccgtggcccgcaggtgatgcaaggatactggcag
cgtccggaagcgaccaaagaagtgctgtcggatgacggttggctgtcgaccggcgatatt
gtgcgttttgatgacgaaggtttcctgcacattgttgatcgtaagaaagatatgattctg
gtgtccggctttaacgtgtacccgaatgaaatcgaagatgtggtcgcactgaacagtaaa
gtgctggaagtggcggcaatcggtcagccgcatgaggtgtccggcgaggtggtgaaaatc
tgcgttgtgaagcgagatgccagcctgacccgtgaagaattgctcagccattgtcgggag
catctgaccggctataaagtaccgaaaattgtcgagttccgtgatgaactgccgaaaacc
aatgtcggcaagattctgcgccgcgccttgcgggaagaatccgataagcaggttgctcag
caagcctga
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