Photobacterium ganghwense: FH974_05055
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Entry
FH974_05055 CDS
T07175
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
pgh
Photobacterium ganghwense
Pathway
pgh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pgh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
FH974_05055 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pgh01007
]
FH974_05055 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgh03016
]
FH974_05055 (aspS)
03029 Mitochondrial biogenesis [BR:
pgh03029
]
FH974_05055 (aspS)
Enzymes [BR:
pgh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
FH974_05055 (aspS)
Amino acid related enzymes [BR:
pgh01007
]
Aminoacyl-tRNA synthetase
Class II (A)
FH974_05055 (aspS)
Transfer RNA biogenesis [BR:
pgh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
FH974_05055 (aspS)
Prokaryotic type
Other AARSs
FH974_05055 (aspS)
Mitochondrial biogenesis [BR:
pgh03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
FH974_05055 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
QSV14970
LinkDB
All DBs
Position
1:1039372..1041156
Genome browser
AA seq
594 aa
AA seq
DB search
MRTQYCGHLNKSLAGQTVELCGWVNRRRDLGGLIFIDMRDREGIVQVVVDPDMKDVFDVA
NQLRNEFCIRLTGEVRTRPESQINKDMATGEVEVLAKGLEIINRSDVLPLDFNQKNTEEQ
RLKFRYLDLRRPEMSDRIKLRAKASSFVRRFLDENGFLDIETPVLTKATPEGARDYLVPS
RVHKGSFYALPQSPQLFKQLLMMSGFDRYYQIVKCFRDEDLRADRQPEFTQIDIETSFMS
AEQVREVTEKMIANMWQELLNVDLGAFPIMKYEEAMRRYGSDKPDLRNPMELVDVADILK
DVDFKVFSGPANDPKGRVAVIRVPGGAVLTRKQIDEYTNFVGIYGAKGLAWMKVNDREAG
FEGVQSPVAKFLNEDIVAQLLDRTQAQTGDILLFGADKKRIVEEAMGALRLKLGNDMELT
DTSAWAPLWVVDFPMFEEDDEGNLHAMHHPFTSPLGVSPEELKANPAGVNSNAYDMVING
YEVGGGSVRIHNADMQSAVFDILGIAADEQRLKFGFLLDALKFGTPPHAGLAFGLDRLVM
LLCGTENIRDVIAFPKTTAAACLLTDAPSIANPAALDELAIAVKAAKEDNAEQA
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcgcacccaatattgtggtcacctgaacaagtcccttgcagggcaaacagtagagcta
tgcggctgggttaaccgtcgccgtgatttaggcggtcttatctttatcgatatgcgagat
cgtgaaggtattgttcaggtagttgttgatccggatatgaaagatgtattcgacgtcgct
aaccaactgcgcaacgagttctgtatccgtctgaccggtgaagtgcgtacgcgtccggaa
agccaaatcaacaaagatatggcgaccggtgaagttgaagtactggcgaaaggtctggaa
atcattaaccgttccgacgtactgccacttgacttcaaccagaagaacactgaagagcag
cgcctgaagttccgttacctggatctgcgtcgccctgaaatgagtgatcgcatcaagctg
cgcgcgaaagcgtcaagcttcgttcgtcgcttcctggatgaaaacggcttcctggacatc
gagacgccggtactgactaaagctacgccggaaggtgctcgtgactaccttgtaccaagc
cgcgtacacaaaggcagcttctacgcgttgccgcagtctcctcagttgttcaagcagctg
ctgatgatgtctggtttcgaccgttactaccagattgttaagtgtttccgcgatgaagac
ctgcgtgctgatcgtcagccggaattcacccagatcgatatcgaaacgtcattcatgtct
gctgagcaggtacgtgaagtgacagaaaagatgatcgcgaacatgtggcaagagctgctg
aatgtggatctgggcgctttcccaatcatgaaatatgaagaagccatgcgccgttacggt
tcagataaacctgacttgcgtaacccgatggagctggtagacgttgctgatatcctgaaa
gacgttgatttcaaggttttctcaggcccggcaaacgatccgaaaggccgtgtggctgtt
attcgcgtaccaggcggtgcggtactgactcgtaagcaaattgacgagtacacaaacttc
gtgggtatctacggcgcgaaaggtctggcttggatgaaagtgaatgaccgcgaagcaggc
ttcgaaggcgttcagtctccggtggcgaaattcctgaacgaagacattgtcgctcagctg
ctggatcgcactcaggcgcaaactggcgatatcctgctgttcggtgcagataagaaacgt
atcgttgaagaagcaatgggcgctctgcgtctgaagctgggtaacgatatggaactgact
gacactagtgcatgggcacctctgtgggtggttgacttcccaatgttcgaggaagacgat
gaaggtaacctgcacgcgatgcaccacccgtttacttctccgctgggtgtttcaccggaa
gagctgaaagcgaatccggctggcgtgaattcaaacgcgtacgacatggtgatcaacggc
tacgaagtgggcggtggttctgtgcgtattcacaatgccgacatgcagtcagcagtattc
gatatcctgggtattgccgctgacgaacaacgtctgaagtttggcttcctgctggatgcg
ctgaaattcggtacgccaccacacgccggtctggcgtttggtcttgaccgtctggtaatg
ctgctgtgcggcacggaaaacatccgtgacgtaattgccttccctaaaaccacggcggca
gcatgtctgctgacagatgctccaagcattgctaacccggctgcgctggacgaactggca
attgccgtgaaggccgcgaaggaagacaacgccgagcaggcgtaa
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