KEGG   Photobacterium ganghwense: FH974_06025
Entry
FH974_06025       CDS       T07175                                 
Symbol
helD
Name
(GenBank) DNA helicase IV
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
pgh  Photobacterium ganghwense
Brite
KEGG Orthology (KO) [BR:pgh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pgh03400]
    FH974_06025 (helD)
Enzymes [BR:pgh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     FH974_06025 (helD)
DNA repair and recombination proteins [BR:pgh03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    FH974_06025 (helD)
SSDB
Motif
Pfam: UvrD-helicase Helicase_IV_N AAA_19 UvrD_C UvrD_C_2 AAA_30 AAA_11 AAA_12 ADDB_N Fy-3 DcrB
Other DBs
NCBI-ProteinID: QSV15148
LinkDB
Position
1:1261893..1263980
AA seq 695 aa
MRLTAGWLAQWLAQGDYCSIALGENCLILDSQTETEEIPFDEWDGAIAVHRGVMWGSFEI
TSADQEYCWTIHGLPWRYCKSFANMLLEAYRNWAQGRVEKLDSLLPEMLKRIDTFTSQDA
YLRESDHRRLHHFLDQSLASTGLTRELAASFRPLAFDKVEPWLEGNGEWVDTSNEKWLEK
EAEKWSSWFDKFESSPLNPSQREAVLINQDHNLVLAGAGTGKTSVLVARAGYLVANQLAQ
PEEILMLAFGRKAAEEMSERLAAKVNNNIKVATFHSLGTQIIKAVEGEMPSVSPLTLDEK
ARTDWLAGVLKEQWENDTSARRWQKHLTQWRIPGFKAENSMEKQARSEQLINWVWRHIEL
IGQRGANKSQLSDSIEQHSQDTAKPRMKSELALLWPCYRAYEQYLKTHKQIDFNTMIQRA
TEYVKEGKFVPTWRFIMVDEYQDISPHRLALIEALCHSKQAAQKPTLFAVGDDWQAIYRF
AGADVNLTTGFEKRFGACHMTELETTYRFNSMIGEVANAFIQQNPNQLKKSLTSFKKQKR
KAVTLLCQDLIDQELAQLASQHSEPVTTLLLARNNNQRPEKLKQWQEKWPQLGLTFMTCH
ASKGREGDYVFVLDVNRGVFPAPDRDTGLAACLQARGESFTDAEERRLFYVALTRAKKHV
WVCAEPEKTSPFVNELIDDNYPVVNKIKRVKAKQK
NT seq 2088 nt   +upstreamnt  +downstreamnt
atgcgtttaacagcggggtggctggctcagtggctcgcccaaggtgattattgcagtatt
gcattaggtgagaattgtctgattttggatagtcagacagaaacagaagaaatcccgttt
gatgagtgggatggcgcgattgccgtacatcggggagtgatgtggggcagttttgaaatt
acctctgccgaccaggaatactgctggacgattcacggcttaccctggcggtactgtaaa
tcgttcgccaatatgttgctggaagcgtaccgtaactgggcgcagggccgagtagaaaaa
cttgattcgctgctgccggagatgctcaaacgcattgatacgtttacttctcaggatgcc
tacctgcgtgaatccgatcaccgccgtcttcatcattttctggaccagtcgctggcgtca
acggggttaacccgagagctggccgcgtcttttcgtccactggcgtttgataaagtcgaa
ccctggctggaagggaacggtgagtgggttgatacctcaaacgagaaatggctggaaaaa
gaagccgaaaagtggtcatcgtggttcgataagtttgaatcttctccgcttaacccatca
cagcgggaagcggtgctgatcaaccaggatcataacttggtgttggcgggtgccggaacc
ggtaaaaccagcgtgctggtggcgcgagcaggttatctggtggctaaccagcttgctcag
ccagaagagattctgatgctggcctttggccgtaaagccgctgaagagatgagcgagcgg
ctggcggcgaaagtgaacaacaacattaaagtcgccacgttccacagtctggggacccaa
atcattaaagcggttgagggtgaaatgccaagtgtttcgccactgactctggatgaaaaa
gcccgtaccgactggttggctggcgtgttgaaagagcagtgggaaaatgacacctcagcc
cgtcgttggcagaaacacctgacccagtggcggattcccggcttcaaagctgaaaactcg
atggaaaagcaggcgcgcagtgaacagctgatcaactgggtatggcgtcacattgagctg
attggccagcgcggcgcgaacaaatctcagctcagtgacagtatcgagcaacatagtcag
gacaccgccaagcctcgcatgaagagtgagctggcactgctgtggccgtgttaccgtgcc
tatgagcaatacctgaaaacccacaagcagattgacttcaataccatgattcagcgcgcg
actgagtacgtgaaggaaggtaagtttgtgccgacctggcgctttatcatggtcgatgaa
tatcaggacatttctccgcaccgactggcactgattgaagcattgtgccactccaagcag
gcagcgcagaagccgacattgtttgccgtcggggatgactggcaggcgatttaccgtttt
gccggtgctgatgtgaatttaacaaccgggtttgaaaaacgctttggcgcctgtcacatg
accgagctggagaccacttaccggtttaacagcatgattggtgaagtggccaatgccttc
atccagcagaacccgaaccagcttaaaaaatcgctgaccagtttcaagaaacagaagcga
aaagcggtgacgttgttgtgtcaggatctgattgaccaggagctggcacaattggcgtcg
cagcacagtgagccggtgacgaccttgctgctggcccgaaataataatcagcgtccggaa
aagctcaagcagtggcaggaaaaatggccacaattgggactaaccttcatgacctgccat
gcaagtaaaggccgtgagggcgattacgtctttgtgctcgatgtgaaccggggagtgttc
ccggcaccggatcgtgataccgggctggccgcttgcttgcaggcgcggggcgaaagcttt
acggatgcagaagagcgccgcttgttctatgttgccctgacccgtgccaagaaacatgtc
tgggtgtgtgccgagccggagaaaacctcgccgtttgtgaatgagctgattgatgataac
tatccggttgtcaataaaatcaagcgtgtgaaggccaagcaaaaataa

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