Photobacterium ganghwense: FH974_06935
Help
Entry
FH974_06935 CDS
T07175
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pgh
Photobacterium ganghwense
Pathway
pgh03420
Nucleotide excision repair
pgh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pgh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FH974_06935
03430 Mismatch repair
FH974_06935
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgh03400
]
FH974_06935
Enzymes [BR:
pgh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FH974_06935
DNA repair and recombination proteins [BR:
pgh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FH974_06935
MMR (mismatch excision repair)
Other MMR factors
FH974_06935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_22
ResIII
Motif
Other DBs
NCBI-ProteinID:
QSV15308
LinkDB
All DBs
Position
1:1476874..1479336
Genome browser
AA seq
820 aa
AA seq
DB search
MTRFTSEQTAFIHHQQGNALCIAGAGTGKTTTLVGLIGEKLQHVSADQMLVLMFNRDIRT
DFQAKLRAEGIDVPVPVHTFHSFCLRFLNQSGFLRETGYRVDYQSGESDKSLVKGVLREL
AGLEKTYQRQQVIKDPKTIELLLSFIGLVKAYMLSPYEVFKLAEINRDYLFIIDAYEKFE
SLRKQQKILFFDDWLVETVKLLEGNEVLRQQYHQRCNMVVVDEFQDINTAQYRLLKQLLG
PATQLLAVGDVDQCIYKWRGSAPQFMLNFEQDFAPATVYTLSQTFRFGHSLALAASHLIA
NNKQRFSEFLTTSGEGVTDTQIVECGSSRQVGEIAQSIQQYLSEGGKPSDVAILVRRWSQ
TLLFELAFLSKNLPYQMPVPSVLANSREVKLLMELMNLAIGRYSGWEVNQRASLLFSLFS
FPHCYVPNKLLRPLCEQLAGMEPLGWMTFLGRYEKANPTLKLENLTERIDLLTRLMRKGS
FKAAEVFLQYRKESGLDSWIWKTEATASEIEEAVERLDSVTTVLESMDQNCEKALQYFEY
YLQQSRSHALTGNPSSSMGNQAMANQAVSPQAVAPQAGNEGSVQLTTIFRAKGCEYKQVY
LPFWDKDAFPYMNKSSGSMGADIEEERRLAYVALTRAKEKASVYYTKTDMPSGSVSHTGK
GMSAVKATNASRFVLEAKVPIATQLGPKLYHEGELPYYSSPVVEEYCRRLGREEDVVVPE
KFHKTALPNHRHGSNADNSDNHGNDSGKDEHYSLKWALAQPLPDNAEKVITAMVKTKNAK
YLDGEIARIIRELDSTALTKKKVLVNRLIVAANARTRVRR
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atgacccgctttacttcagaacagaccgcctttattcaccatcagcagggcaatgcctta
tgtattgccggcgccggcacgggcaaaacgaccacgctggttggactgatcggtgaaaaa
ctacagcatgtgtctgctgaccagatgctcgttctgatgtttaaccgcgatatccgcact
gactttcaggccaaactcagggctgaaggtattgatgtgccggtaccggtgcatacgttc
cacagtttctgcctgcgtttcctgaaccagagcggttttttgcgcgaaaccggttaccgg
gttgattaccagagcggggaaagtgacaaatcactggtcaaaggcgttctgcgtgagctg
gccgggctggagaaaacctatcagcgccagcaggtgattaaagaccccaaaaccattgag
ctgttgctgagttttatcgggctggtcaaagcgtacatgctttcaccttacgaggtgttt
aagctggcggaaatcaaccgggactatctgttcattattgatgcgtacgagaaatttgaa
tcgctcagaaagcaacaaaaaatcctgttctttgatgactggctggtggaaaccgtcaag
ttgctcgaaggcaacgaggtcttgcggcagcagtatcaccagcgatgcaacatggtggtg
gttgatgagtttcaggatattaataccgctcagtaccgactgctaaagcaattattgggg
ccggcaacccagttgcttgccgtgggtgatgtcgatcagtgtatctataaatggcgtggc
agcgcgccgcaattcatgctgaattttgagcaggattttgcgccggcgaccgtttacacc
ttgtcccagaccttccggttcgggcacagtctggctcttgctgccagccatctgattgcc
aacaataagcagcgtttcagcgaatttctgaccacgtctggtgagggcgtgacggatacg
cagattgtggagtgtggttcatcgcgtcaggttggtgaaattgcccagtcgattcagcag
tacctgtcggaaggcggtaaaccgtcggatgtggcgattctggttcggcgctggtcgcag
accttgctgtttgaactggcatttctcagtaagaatcttccataccagatgccggtgccg
tcagtgttggcaaacagtcgggaagtaaaactgctgatggagctaatgaacctggcgatc
ggtcgttattccggctgggaggttaaccagcgagcgtcgctattgttcagcctgttttcg
tttcctcattgctatgttccgaataagctgctgcgaccactgtgtgagcaactggcagga
atggaaccgctgggctggatgacgtttctggggcgatatgaaaaagcaaacccgaccctg
aaactggaaaacctgacagagcggattgacctgctgacacgcctgatgcgaaaaggcagt
ttcaaagctgcggaggtctttttgcagtaccgcaaagaaagcggcctcgacagctggatc
tggaaaactgaagcgaccgcttcggaaattgaagaagcggtggaacggctcgacagtgtg
acgacagtgctggagtcgatggatcagaactgtgagaaggcgctgcaatactttgagtat
tatctgcagcaatcccgatctcatgcgttaaccggtaacccgtcatcgtctatgggcaat
caggctatggcaaatcaggcggtctcacctcaagctgtggcacctcaggcagggaatgag
ggcagtgtgcaactgaccacaatctttcgggccaaaggatgcgaatataaacaggtctac
ttgccgttctgggataaagacgcttttccttatatgaataaatcgtccggcagtatgggg
gcggatattgaggaagagcgccgactggcttacgtagccctgacccgggcaaaagaaaag
gcgagtgtttattacaccaaaacagatatgccatcgggcagtgtcagccacacaggtaaa
ggcatgagtgctgtcaaagccacgaatgccagccgttttgtgctggaagccaaagtgccg
atcgcgactcagcttggcccgaaactgtaccacgagggggagctgccgtattactcaagc
ccggtggttgaagagtactgccgtcgtctcgggcgcgaagaggatgtggtcgtgcctgaa
aaattccacaaaactgcgctgcctaatcatcgtcatggctccaatgctgacaacagcgat
aaccacgggaatgacagtgggaaggatgaacattatagcctgaagtgggcgctggcgcag
cccttaccggacaatgcggaaaaagtgatcaccgccatggttaaaacaaaaaatgccaaa
tatctggatggcgaaatcgcccggattatccgtgagctggattcgacggcattgaccaag
aaaaaggtgctggttaaccggttgatcgttgctgctaatgcaagaacccgggtgcggcgc
tga
DBGET
integrated database retrieval system
