Photobacterium ganghwense: FH974_08345
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Entry
FH974_08345 CDS
T07175
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pgh
Photobacterium ganghwense
Pathway
pgh03030
DNA replication
pgh03430
Mismatch repair
pgh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FH974_08345
03430 Mismatch repair
FH974_08345
03440 Homologous recombination
FH974_08345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgh03032
]
FH974_08345
03400 DNA repair and recombination proteins [BR:
pgh03400
]
FH974_08345
Enzymes [BR:
pgh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FH974_08345
DNA replication proteins [BR:
pgh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FH974_08345
DNA repair and recombination proteins [BR:
pgh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FH974_08345
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
QSV12794
LinkDB
All DBs
Position
1:1800913..1801527
Genome browser
AA seq
204 aa
AA seq
DB search
MPQANSVVVLDFETTGLSPNLGDRAIEIGAVKLVNGEVVDTFQQLMNPGFRVSSFIESYT
GITNNMLRTAPSCDEVMASFSEFILDENLIAHNASFDKRFLDAELERINRGYSGEFACSL
LVARRLIQGAPSHKLGELVRYKNIDNDGVFHRALADAQMTAKLWLLMVDELEQLGIAKPS
FQFMKTVSKTAKGNVNLLLAKSRA
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgcctcaagcaaattccgtggtagtacttgactttgaaaccactggcctttctcctaat
ttgggtgaccgcgcaattgaaatcggtgcggttaaattagtcaatggtgaagttgtcgat
acttttcagcaactaatgaatcctggcttcagagtgagctcattcattgaaagttatact
ggtatcaccaataacatgttacgtacagcaccaagctgcgacgaggtgatggcatcgttt
agtgagttcattctcgatgagaaccttatagctcataacgcttcgttcgataaacgattt
ctagacgcagagcttgagagaatcaaccgtggttattcaggagaattcgcttgctcctta
ctggtggcaagacgactgattcaaggtgcaccgtcacacaaacttggtgagctcgttcgc
tacaaaaacatcgacaacgatggtgtttttcaccgagcattagccgatgcacaaatgaca
gccaaactctggcttctaatggtagatgaattagagcaattaggtatcgccaagcctagc
ttccagtttatgaaaaccgttagtaaaacagcaaaagggaacgtgaatctgctactcgct
aaaagtcgtgcttaa
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