Photobacterium ganghwense: FH974_10535
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Entry
FH974_10535 CDS
T07175
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10912
two-component system, repressor protein LuxO
Organism
pgh
Photobacterium ganghwense
Pathway
pgh02020
Two-component system
pgh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pgh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FH974_10535
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FH974_10535
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pgh02022
]
FH974_10535
Two-component system [BR:
pgh02022
]
Lux family
LuxQN/CqsS-LuxU-LuxO (quorum sensing)
FH974_10535
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
Mg_chelatase
AAA_5
AAA
AAA_19
AAA_2
DUF1623
HTH_30
HTH_23
AAA_16
Parvo_NS1
HTH_29
TIP49
HTH_28
AAA_22
nSTAND3
HTH_7
AAA_PrkA
Motif
Other DBs
NCBI-ProteinID:
QSV13183
LinkDB
All DBs
Position
1:complement(2322863..2324296)
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AA seq
477 aa
AA seq
DB search
MESKSKQRQVLMVEDTASVATLYKSYLNPLGVAVTIVGTGSDALAFIKDTVPDLILLDLR
LPDMTGLEVLEAVKNDYPNVPVVIMTAHGSIDVAVEAMRYGAQDFLIKPCEADRLRVTVN
QALKEEQRKSEGQTTSKQTGAQYQGFIGNSLPMQAVYRVIESAASSKATVFITGESGTGK
EVCAEAIHAASPRSDKPFVALNCAAIPKELIESELFGHVKGAFTGASTERQGAVEMANNG
TLFLDELCEMDLDLQSKLLRFIQTGTYQKVGSSKTQSVDVRFVCATNRNPWLEVQEGRFR
EDLYYRLHVIPITLPPLRDRGEDVLEIAHALLALMSVEEGKNFSRFAPEVMELFRRYHWQ
GNVRELQNVIRNIVVLNSGEEVTLMMVPPPINNGGVNFASPRNTVVSTPLEGDPVPSVGT
SQIVDKSQVEPLWVVEKRAIQAAIDACDGNIPRAAGLLEVSPSTIYRKLQTWQEAQG
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggagagcaaatctaaacagcgtcaagtcttgatggttgaagacacggcgtccgtagcg
acgttgtacaagtcctacctgaatccgcttggagtggctgtcactatcgttggaacaggt
tccgatgcgctggcgtttattaaagataccgtcccggatttgatcctgcttgacttgcga
ttgcctgatatgaccggtttagaagtgctggaagcggtcaaaaatgattatccgaatgtg
ccggtcgtgatcatgacggcgcatggttcaatcgatgtggcggttgaagccatgcgatat
ggcgctcaggactttttgattaaaccgtgcgaagccgatcggctccgggtgacagtcaat
caggcgctgaaagaagaacagcgcaaaagtgaagggcagacaacctcaaaacaaaccggt
gcgcagtatcagggatttatcgggaacagcttaccgatgcaagccgtgtatcgggtgatt
gaatcagcggcttccagtaaagcgacagtctttattaccggtgaaagcggaaccggtaaa
gaagtgtgtgccgaagccattcatgctgccagcccacgcagcgataagccgtttgtcgcg
cttaactgtgccgcgattccaaaagagctgattgaaagtgaactgttcggccacgtgaaa
ggtgcgtttaccggggcatcgaccgagcgtcagggcgctgtggagatggcgaacaacggc
accctgtttcttgatgagttatgtgaaatggatttggatttgcaaagcaagttgcttcgc
tttattcaaaccggcacttatcagaaggtgggctcatccaaaacgcagtcggttgacgtc
cgttttgtctgtgcaacaaaccgtaacccgtggttggaagtgcaagaaggtcgttttcgt
gaagatctatactaccgcctgcatgttattccgataaccctgccaccacttcgtgatcgt
ggggaggatgtccttgaaattgcgcatgccctgctggcgttgatgtcagtggaagagggc
aaaaatttcagccgttttgcacctgaagtcatggagttattccgtcgctaccactggcag
gggaatgtccgagagttgcagaatgtaattcggaatatcgtcgtgctcaatagtggtgaa
gaagtcaccctgatgatggttccgcctcccattaacaatggtggcgttaattttgcatct
cctcgtaacacagtggtgagtaccccgctggagggcgatccagtaccgtcggtgggaacc
agccaaattgtagataagtcacaggttgaaccgctctgggtagtcgaaaagcgagcgatt
caggcggccatcgatgcctgtgatggaaatattccgcgcgctgcgggcttattggaagtc
agtccgtcaacgatttatcgaaaattacaaacctggcaggaagcccaaggttag
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