Photobacterium ganghwense: FH974_11225
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Entry
FH974_11225 CDS
T07175
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pgh
Photobacterium ganghwense
Brite
KEGG Orthology (KO) [BR:
pgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgh03016
]
FH974_11225 (truA)
Enzymes [BR:
pgh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
FH974_11225 (truA)
Transfer RNA biogenesis [BR:
pgh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FH974_11225 (truA)
Prokaryotic type
FH974_11225 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
RTC_insert
Motif
Other DBs
NCBI-ProteinID:
QSV13311
LinkDB
All DBs
Position
1:complement(2471547..2472332)
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AA seq
261 aa
AA seq
DB search
MRIALGIEYDGAKYYGWQRQREVDSVQERLEKALSKIANHPIEVQCAGRTDAGVHGTGQV
VHFDTNVNRKLVAWSMGANAHLPGDIAVRWAKEVNDDFHARFSATARRYRYIIYNHALRP
AILGKGVSHYHGELDEKLMHEAGQYLLGENDFTSFRAVHCQSLSPWRNLMHLNVSRQGNF
VIIDIKANAFVHHMVRNITGSLIKVGKGEEKPEWIKWLLEQKDRTLAGATAKAEGLYLVD
VDYPAEFELPRAPIGPLFLPD
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atgcgaattgcgttaggtattgaatacgacggagcaaaatactacggctggcagcgccag
cgcgaagtagacagtgttcaggagcgtttggaaaaggcgctgagtaaaattgccaaccac
ccgattgaagtacagtgtgccggacggacggatgccggggtgcatggcaccggacaagtg
gtacattttgataccaatgtaaaccgtaagctggtggcctggagcatgggagcaaatgcc
cacttgccgggagacattgcggttcgttgggcaaaggaggtcaatgacgatttccatgcc
cgattcagtgcgacggcgcgacgttaccgctatattatttacaaccatgcattgcgtcct
gcaattctgggcaagggtgtcagccattaccatggtgagctggacgaaaaactgatgcac
gaggccggtcagtatctgctcggtgaaaatgatttcacctcttttcgcgccgtgcattgt
cagtcattaagcccatggcgaaacctgatgcatctcaacgtcagccgacagggcaacttt
gtgattattgacattaaagccaatgcatttgtccaccatatggtacgtaacattaccggc
agcctgatcaaagtcggcaaaggtgaagaaaaacctgagtggatcaaatggctgctggaa
caaaaagatcgtaccttggcaggggcaacagcaaaggcggaaggtctttatctggttgat
gtcgattatccggcggagtttgagttgccacgagcaccgattggtccgctatttctgccg
gattaa
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