Photobacterium ganghwense: FH974_11430
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Entry
FH974_11430 CDS
T07175
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
pgh
Photobacterium ganghwense
Pathway
pgh00521
Streptomycin biosynthesis
pgh00523
Polyketide sugar unit biosynthesis
pgh00541
Biosynthesis of various nucleotide sugars
pgh01100
Metabolic pathways
pgh01110
Biosynthesis of secondary metabolites
pgh01250
Biosynthesis of nucleotide sugars
Module
pgh_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pgh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FH974_11430 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FH974_11430 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FH974_11430 (rfbC)
Enzymes [BR:
pgh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
FH974_11430 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Polysacc_synt_C
Motif
Other DBs
NCBI-ProteinID:
QSV13349
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Position
1:complement(2522790..2523332)
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AA seq
180 aa
AA seq
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MKVIDTAIPDVKIIEPAVFGDERGFFMETWQQEKFCELVANRTFVQDNHSKSKKGILRGL
HYQTENTQGKLVRVVSGEVYDVAVDIRKSSPTFGQWVGVLLSAENKRQLWVPEGFAHGFY
VTSDEAEFVYKCTDYYNPEAEHSILWNDPELSIDWPLDQEPILSEKDKIGDLLKATVGLK
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttattgatactgctatcccggatgtaaaaatcattgagcctgctgtgttcggt
gatgagcgtggcttctttatggaaacttggcaacaggaaaaattctgtgagttagtagca
aaccgaacttttgttcaggataaccactcgaagtctaaaaaaggtatcttaagaggtcta
cattaccaaacagagaatactcaaggtaagttagtacgagtagtctcaggtgaagtatat
gatgtcgcagtagatattcgaaaaagttcaccaacattcgggcaatgggtaggtgttctt
ctgtcagcagaaaataagcgtcaactttgggtgccagaaggttttgctcatggtttttat
gtaaccagtgatgaggcagaatttgtttataaatgtacagattattacaatccagaggct
gagcattcgattctctggaatgatccggagctatcaattgattggccattagatcaagag
ccaattttgtctgaaaaagataaaattggtgatttattgaaagctacggtaggtttgaaa
taa
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