Photobacterium ganghwense: FH974_12535
Help
Entry
FH974_12535 CDS
T07175
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pgh
Photobacterium ganghwense
Brite
KEGG Orthology (KO) [BR:
pgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgh03400
]
FH974_12535
DNA repair and recombination proteins [BR:
pgh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FH974_12535
Archaeal homologous recombinant proteins
FH974_12535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND3
AAA_21
ABC_ATPase
ABC_tran
MeaB
DUF87
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QSV13557
LinkDB
All DBs
Position
1:complement(2751939..2755724)
Genome browser
AA seq
1261 aa
AA seq
DB search
MKILALRGENLASLQQPFEIDFAGGRLGEAGLFAITGKTGAGKSTLLDAICLALYDRIPR
LQSNKKNDAEIGRDDESNRIKANDVRSILSRGKAEGYAEVDFMANDGTAWRAHWHVRRAR
SKADGRIQAAEQWLENLDTGQRFAGKKAELQTEIERLIGLTFEQFRRAVMLPQGEFAAFL
KAGSDERAALLERMTGGEIYGRLSVAAYERARDEKQKLTQLQAQLGDIELLDDEQKAELS
AQLEQFKAQLQGIDQSLTALAQHQQALETEARLAQQCADAQQARQQAEQQHQEAAPRRET
LVQIAKAQPARHDFSLLQKTRLQLAKLETSITNAQQSLVQDKQQLVNADGAVQQARTALN
IARQQWEALEPKLKQVTVLDEQLAATQRQLSAIEAEFQQHQNDCQRQQTALDEKKRQQLQ
WRTRQHQLRIQLEQYHELAGVAEQYQPVLDNLDQYLSAHRTLGRLAQEKQQILHEQQSQS
RNFALLEQQQKEVSGHLGELEQQLTRLDLAQQEQQLADSQKRYNDKQAELDTLRQAMSGT
KEWAGLLEQTEKLQGERQELTEYLTQVEQRLAALAPAMEQLRARYQEAEQQFQHSLAVVN
LSEYRSQLKPDTPCPLCGSEDHPYAAQHPVVEGLLHQQQQRLRELQQQLQDGEGERRHLQ
QQLPHGQQRLAVIDNELHRFRQYQDQLLAPLLDVLKQLELEESLTVSPDTARLNDQLRQW
QQDAEQAYRDIRLQQQAMELAQQQIQHGRHLQHQQHQLQQAATEMKERQHQLEQSATQWK
ERLQSIEQQSETQQVILAARSEALNEQYGSNQWLQMLRQHGSEQYIHQLKQQVEHYLSGK
KELEQTEQQLTELAPQLAELEAGLAAGYRQLAEWQQKAATLQQQAESTWQQRVAIIGEQN
ADSLAAQHKAAMSEAQQRLTETEQAQRQAGEKVAAAEAALTGWQQQEKETAAEHRQVVHD
WLGWQEKLGLNEHQLMQLLSKDEHWQEQEQAALKALDDALTQAASVLKERQRAIELHQAA
ADAARDWGEAFELALNSAEPISVQLAPLQTQWQQDKAGLEEQIFRLRQRLVQAEQALQQA
GELTEKLAAQQQQTELWGQMSELIGSATGNKFRTLAQGLTLQQLVVLANEHLQELAPRYA
LQPVPGSPLALQVIDHDMGDEVRSVESLSGGESFLVSLALALALASLAADTRQLGSLFID
EGFGTLDPDSLEMALSCLDALQADGRQIGVISHVSTLVERIGVQVCVEAQGGGRSKIAVK
G
NT seq
3786 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatacttgcgctacgtggtgaaaaccttgccagtctgcagcaaccgtttgagatc
gattttgccggtggccggctgggcgaagccggtttgtttgccatcaccggtaagaccggg
gccggaaaatccacgctgctggatgccatctgtctggcgctgtacgaccgcattccccgc
ctgcaatcgaacaagaaaaacgatgctgaaattggtcgcgatgatgagtcgaaccggatc
aaggccaatgacgtgcgcagcattctgtcgcgcggcaaagccgaaggctacgccgaggtg
gatttcatggccaatgacggcaccgcctggcgggcccactggcatgtgcgccgcgctcgg
agcaaggcggacggccgtattcaggccgcggaacaatggctggaaaacctcgacaccgga
cagcgttttgccggtaaaaaagccgagctgcagacggagattgagcgcctgattggcctg
acgtttgaacagttccgccgggcggtaatgctgccgcagggggaatttgccgcgttcctt
aaagccggatccgacgagcgtgccgctctgctcgaacgcatgaccggcggtgagatttac
ggccgcctgtccgtcgcggcctatgaacgcgcccgggacgaaaaacagaaactgactcag
cttcaggcgcagctgggggacattgaactgctggatgatgagcaaaaggccgagttatcc
gctcaattggaacagttcaaagcgcagctgcaaggtatcgatcaatcactgacggcgctg
gcgcagcatcagcaggcgctggagaccgaagcgcgcctggcgcagcaatgcgcggatgcg
cagcaggcccgccagcaagcagaacaacagcaccaggaggcggctccccgtcgtgaaaca
ctggtacagatagccaaagcgcaaccggccagacacgatttttccctgctgcagaaaacc
cggttgcagttggcgaagctggaaacctcaatcaccaatgcccagcaaagtctggttcag
gacaagcagcagctggtcaatgccgatggcgcggtgcagcaggcccgcacagccctgaac
atcgcccgccagcagtgggaagcgctggagccgaaactcaagcaggtcacggtactggat
gaacaactggcggcaacccagcgtcagttgagtgctattgaggctgagttccagcagcat
cagaatgactgtcagcgccagcaaactgctctggacgagaaaaaacgccagcagttgcag
tggcgaacccgtcagcatcagttgcggatccagctcgagcaatatcatgaactggccggt
gtcgcggagcagtatcagccggttctggataacctggatcagtacctctcggcgcatcgc
accttaggccgtctggctcaggaaaagcagcagatcctgcatgagcagcaatcgcagtct
cgcaattttgcgctgctggagcagcaacaaaaagaggtgagcggtcacttaggcgagctt
gagcagcagctgacccgactggatctggcgcaacaagagcagcagctggccgacagccag
aaacgatacaacgacaagcaagccgaactcgataccctgcgccaggcgatgtccggcacc
aaagagtgggccgggctgctggagcagacggaaaaactgcagggtgagcgacaagagttg
actgagtatctgactcaggtggagcagcgactggcggcactggctccggcgatggagcag
ttgcgggcccggtatcaggaagccgagcagcagttccagcatagtctggccgtggtgaac
ctttcggagtaccgcagccagcttaagcctgataccccgtgcccgttgtgtggttcggaa
gatcatccgtacgccgcgcagcatccggtggttgaaggcttgctgcaccaacagcaacaa
cgcctgcgtgaactgcagcagcaactgcaggacggagaaggagaacgccgccacctgcaa
cagcagttaccacacggtcagcagcgtctggcggtgattgataatgagttgcaccgtttc
cgtcagtatcaggatcaactgctggctccgctgctggatgtgctcaaacaactggagctg
gaggagagcctgacggtgtcaccggacaccgcccggctgaacgaccaattacgccaatgg
cagcaggacgctgagcaggcttaccgtgacatccgtttgcagcagcaggcgatggaactg
gcccagcagcagattcagcacgggcgtcatctgcaacatcagcaacatcagttgcagcag
gccgccacggaaatgaaagagcgtcagcaccagctggagcagagtgcgactcagtggaaa
gaacgactgcagtcgattgagcaacagagcgagacccaacaggtgattctggcggctcgc
agtgaggcactgaacgagcagtacggcagcaaccagtggctgcagatgctgcgtcagcac
ggttcggagcagtatattcatcagctgaaacaacaggttgaacattatctttccggtaag
aaagagctggagcagaccgagcagcaattgacggaactggcaccgcagttggcagaactg
gaagccggactggcggcaggctatcgccaactggcggaatggcagcagaaagcggcgacg
ttgcagcagcaggcggaatctacctggcagcaacgggtcgctatcatcggtgagcagaat
gctgacagcctggcggcccagcacaaagccgctatgtctgaggcccagcagcgactgact
gaaacggagcaggcgcagcgccaggccggtgagaaagtggccgccgccgaggcagcgctg
acaggctggcagcagcaggaaaaagagacggcagcggagcaccgtcaggtggttcatgac
tggctgggctggcaggaaaagctgggactgaatgaacatcagctgatgcagttgctgagt
aaagatgaacactggcaggagcaagagcaggcggccctgaaggcgctggatgatgcgctc
acccaggcggcgtcagtgctgaaggagcggcagcgcgccattgagctgcatcaggctgca
gccgatgctgctcgtgactggggcgaggcttttgagttggccctgaattcggcagagccg
atcagcgtccagctggcaccgttgcagacccagtggcagcaggacaaagccggactggaa
gagcagatcttccggctgcgtcaacggctggtacaggctgaacaggcactgcagcaggcc
ggggagctgaccgagaagctggcggcgcagcaacagcagactgaactgtggggtcagatg
agcgagctgattggctcagcaaccggcaacaagttccgcacgctggcacagggactgacc
ctgcagcagctggtggtgttggccaatgagcatttgcaggagctggctccgcgttacgcg
ctgcaaccggttccgggcagcccgctagccttgcaggtgattgaccacgacatgggcgac
gaagtgcgcagcgtggaatctctgtcaggcggggaaagtttcctggtgtcgctggctctg
gcgttggcgttggcctccctcgcggccgatacccgccaactggggtcactgtttattgac
gaaggttttggtacgctggacccggacagcctggaaatggcactgtcctgcctggatgcg
ctgcaggccgatggacgtcagatcggcgtgatctcccatgtcagcacgctggtggagcgt
atcggggtgcaggtttgcgttgaagcgcagggcgggggacggagtaaaatagcggtcaaa
ggttaa
DBGET
integrated database retrieval system
