Photobacterium ganghwense: FH974_12815
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Entry
FH974_12815 CDS
T07175
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pgh
Photobacterium ganghwense
Brite
KEGG Orthology (KO) [BR:
pgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgh03400
]
FH974_12815 (radA)
DNA repair and recombination proteins [BR:
pgh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
FH974_12815 (radA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
DUF7125
Zn_ribbon_LapB
ChlI
DnaB_C
GvpD_P-loop
RecA_N
Lon_C
AAA_22
ABC_tran
AAA
AAA_14
SLFN-g3_helicase
AAA_24
AAA_16
AAA_28
nSTAND3
AAA_29
nSTAND_NTPase5
Elong_Iki1
MCM
AAA_33
ATPase_2
TK
PAXNEB
NPHP3_N
DAP3
Motif
Other DBs
NCBI-ProteinID:
QSV13607
LinkDB
All DBs
Position
1:complement(2823111..2824499)
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AA seq
462 aa
AA seq
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MAKTKRAYVCSDCGADFPRWQGQCSACAAWNTITEFTIPKTRAAVGGAAAAGTSSYAGSS
TKVQKLSEVESKDLPRYSSGVSELDRVFGGGIVPGSVLLLCGDPGAGKSTLLLQSIGAVA
ATKSALYVSGEESIHQISQRAKRLGIDHLDKISVVAETSVEQVLNHITAQKAEFVIIDSI
QTMTVAHNDSAAGSPSQVKESAAALTRFAKTEGVTFMIVGHINKDSNVAGPMQLIHIVDG
LFALSSTADEKFRVLRTSKNRFGADSESCFFAMTETGMKQVKNPSAIFLSRSNKNHAGSA
CTTLWEGTRPLLVEIQALCNQSVTENPRRLTVGYDSNRLAMSIAVLARHGGVMLSDMDIF
VNCVGGIKVDETSADLAVLLAIFSSFKNAPIPQDVLVFGEIGLNADIRPAANGVERIREA
AKQGFTRAIVPRANASRQVPGIEIIPVEDLQEALTAFDRVCG
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaccaagcgtgcttatgtctgtagcgactgtggagccgatttcccccgctgg
caggggcagtgtagcgcgtgtgccgcatggaatacgataacggagtttaccataccgaaa
acccgtgctgccgttggcggggctgccgcagcaggcaccagtagctatgctggcagctcg
accaaagtccagaagctgtcggaagtcgaaagcaaggatctgccgcgctacagctcgggc
gtgtctgagctggatcgggtgtttggcggtggtatcgtgccgggttccgtgctgttgctg
tgcggcgacccgggagccggtaagtcaacgctgcttctgcaaagcatcggcgcggtggcg
gcaaccaagtcagcgttgtacgtgtccggggaagagtcgattcaccagatctcccagcgc
gccaaacgtctgggtatcgatcaccttgataagatcagcgtagtggctgaaacctctgtt
gagcaggtgctcaaccatatcaccgcacaaaaagcggagtttgtgatcattgactcgatc
cagactatgactgttgcccataacgattcggcggccggcagcccgagccaggtgaaggaa
tcggcggcggcgttgacccggtttgccaaaaccgaaggggtcacttttatgatcgtgggt
cacatcaataaagactcgaatgtggccggcccgatgcagctgatccacattgtcgacggg
ttgttcgcgctgtcttctacggccgatgaaaaattccgggtgttgcggacctcaaagaac
cgtttcggggccgattccgagtcctgcttctttgccatgacggaaaccgggatgaagcag
gtcaagaacccgtcggcgattttcctcagccgctcgaacaagaatcacgctggttcggcg
tgtaccacattgtgggaagggacgcgtccgttgctggtggaaattcaggcgctgtgcaac
cagtccgtgacggaaaacccgcgtcggctgacggtcggctatgactcgaaccgcctggcg
atgtcgattgccgttctggcccgccatggcggggtgatgctgtcggacatggacattttt
gtgaactgtgtcggcgggatcaaggtggatgagacgtctgcggatttggcggtgctgctg
gcgattttctcaagctttaaaaatgccccgatcccgcaggatgtgctggtcttcggggag
attggcctgaatgccgatattcgtccggcggccaatggagtcgagcgtatccgcgaagcg
gccaaacagggttttacccgggcgattgtgccgagagctaatgccagccgtcaggtgccg
gggattgaaattatcccggtcgaagatttgcaggaagccctgactgcgtttgatcgcgtg
tgtggctaa
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