Photobacterium ganghwense: FH974_12935
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Entry
FH974_12935 CDS
T07175
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pgh
Photobacterium ganghwense
Brite
KEGG Orthology (KO) [BR:
pgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgh03016
]
FH974_12935 (truB)
Enzymes [BR:
pgh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FH974_12935 (truB)
Transfer RNA biogenesis [BR:
pgh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FH974_12935 (truB)
Prokaryotic type
FH974_12935 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
QSV13629
LinkDB
All DBs
Position
1:complement(2852180..2853130)
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AA seq
316 aa
AA seq
DB search
MARRRKGRPVDGVILLDKPTGISSNDALQKVKRIFFAEKAGHTGALDPLATGMLPICFGE
ATKFSQFLLDSDKRYRVIAKLGERTDTSDSDGEVVQTREVKVDRGQLERCIAKFRGTTDQ
VPSMYSALKYQGRKLYEYAREGIEVPREARKITVYSVELLRFSNNEVEMELHVSKGTYIR
TIVDDLGEMLGCGAHVTFLRRTGVSNFPVERMVTLEQLEAMLEQAKADDVVPSEVLDQLL
LPTDTAVQDLPEVNILPALAVYILNGNPVNAGRVPAEGTQVRITVGQQRDFIGVGVIDRE
GMLAPKRVMANKQTIQ
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtcgtcgtaaggggcgtccggttgacggggtgatcctgctggacaaaccaacc
gggatcagttcaaacgatgcgctgcagaaagtgaagcgtatcttcttcgcggaaaaagcc
ggccataccggggcgctggatccgctggcaaccgggatgctgccaatttgttttggtgaa
gcaaccaagttttctcagttcctgctggactctgacaaacgctaccgtgttattgccaaa
ctgggtgagcggaccgacacgtctgactcggacggtgaagtggtgcagacgcgtgaagtg
aaagtcgaccgcggtcagctggaacgctgcattgccaaattccgtggcaccacggatcag
gtaccgtcgatgtactcggcactgaagtaccagggccgtaagctgtatgaatatgcccgt
gaaggcattgaagtaccgcgtgaagcccgcaagatcaccgtgtattcggttgaactgctg
cgctttagcaacaacgaggtggaaatggagctgcatgtctcgaaagggacgtacatccgt
accatcgttgatgatctgggcgaaatgcttggttgcggcgcgcacgtaactttcctgcgc
cggaccggagtgtcgaacttcccggttgagcgcatggttaccctggaacagctggaagcg
atgctggagcaggccaaagcggatgatgtggtgccaagtgaagtgctggatcaacttctg
ctgcccacggataccgcggttcaggacttgcctgaagtgaacatcctgccggcgctggcc
gtctatattctgaacggtaacccggttaatgcggggcgtgtgccggcggaagggacgcag
gtacgcatcacggtaggtcaacagcgcgattttatcggcgttggcgtgattgaccgggaa
ggcatgctggcaccgaaacgtgtgatggcaaacaagcaaaccatccaataa
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