Photobacterium ganghwense: FH974_13220
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Entry
FH974_13220 CDS
T07175
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pgh
Photobacterium ganghwense
Pathway
pgh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pgh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
FH974_13220 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgh03400
]
FH974_13220 (ung)
Enzymes [BR:
pgh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
FH974_13220 (ung)
DNA repair and recombination proteins [BR:
pgh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
FH974_13220 (ung)
Prokaryotic type
FH974_13220 (ung)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QSV13681
LinkDB
All DBs
Position
1:complement(2918182..2918862)
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AA seq
226 aa
AA seq
DB search
MSQPLTWQQVITAEREKPYFQQIEHFVAAERESGKAIYPPEAEVFSALNSTPLEQVKVVI
LGQDPYHGPEQAHGLSFSVRPGIKVPPSLANMYKELATDIPGFTAPEHGYLQGWAEQGVL
LLNTVLTVEQGKAHSHAKIGWETFTDRLIEVINQQCEGVVFLLWGAHAQKKGKKIDTARH
HVLHSAHPSPLSAYRGFFGCKHFSQTNKLLEQMNKSPINWMLADRT
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaccgctgacctggcagcaagtcatcacggctgagcgcgagaagccttacttt
cagcaaatcgagcactttgtggcggctgagcgtgagtccggcaaagccatttatcctccc
gaggcggaggtgttcagcgcgctgaacagcaccccgctggagcaggtgaaagtcgttatt
ttgggccaggatccgtatcacgggccagagcaggcgcacggtttgagcttttccgttcgg
ccgggaatcaaagtgccgccgtcgctggcaaacatgtataaagaactggcgaccgatatt
ccgggcttcacggctcccgagcacggctatctgcaaggttgggccgagcagggcgtgttg
ttgctcaatacggttctgacggtggagcagggcaaagcgcattcgcatgccaagatcggc
tgggagacgttcaccgaccgcttgattgaagtgattaatcagcagtgcgagggggtcgtg
ttcctgctttggggagcccatgcgcagaaaaaagggaagaaaatcgacactgcccgccac
catgtgctgcattcagcgcatccgtcaccgctttccgcgtatcgcggattcttcggctgc
aagcacttctctcagaccaataagttattggagcagatgaataaatcgccgattaactgg
atgttagccgatcgtacctaa
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