Photobacterium ganghwense: FH974_15180
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Entry
FH974_15180 CDS
T07175
Symbol
trmA
Name
(GenBank) tRNA (uridine(54)-C5)-methyltransferase TrmA
KO
K00557
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
pgh
Photobacterium ganghwense
Brite
KEGG Orthology (KO) [BR:
pgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pgh03016
]
FH974_15180 (trmA)
Enzymes [BR:
pgh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
FH974_15180 (trmA)
Transfer RNA biogenesis [BR:
pgh03016
]
Prokaryotic type
tRNA modification factors
Methyltransferases
FH974_15180 (trmA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_25
Methyltransf_4
MTS
TRM5-TYW2_MTfase
Methyltransf_31
Methyltransf_15
Methyltransf_11
Cons_hypoth95
PrmA
DREV
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
QSV13972
LinkDB
All DBs
Position
1:3350456..3351562
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AA seq
368 aa
AA seq
DB search
MATTAINPAEYQTQLDEKAARIQNIFADFDTPELEVFASPAEHYRMRAEFRVWHEGEDLY
YIMFNQETREKYRVDQFPAASRLINDLMPLLVDALKPVKALRHKLFQVDFLSTLSGEILV
SLLYHRQLDDEWVREAKALKQRLNDEGFKLNFIGRARKQKIVLDQEFVIEKLNVHDQVLT
YKQVENSFTQPNGEVAQKMLEWAVDCTQDSDGDLLELYCGNGNFSLALAKNFDRVLATEL
AKPSVDSAQYNIAVNQIENVQIIRMSAEEFTEAMEGRREFRRLKDQGIDLQSYNCNTIFV
DPPRSGMDEGTCRMVQGYERIMYISCNPDTLKENLEILGETHRITRFALFDQFPYTHHME
AGVLLERK
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccaccgcaatcaatccggctgagtaccagactcagcttgatgagaaagcagcg
cgtatccagaatatcttcgcagatttcgataccccggaactggaggtttttgcctcacct
gctgagcactaccgcatgcgtgccgagtttcgggtctggcatgaaggcgaagacctgtac
tacatcatgttcaatcaggaaacccgcgagaaataccgcgtggatcagtttccggcggcc
agccgcctgattaatgatctgatgcctctgctggttgacgccctgaaaccggtcaaagcc
ctgcgccacaagctgttccaggttgattttctctctaccctgagcggtgagattctggtt
tccctgctgtatcaccgtcaactggatgacgaatgggttcgtgaagccaaagcactgaaa
cagcgcctgaacgatgaaggcttcaagctgaatttcattggccgcgcacgcaaacagaaa
atcgtactggatcaggaattcgtgatcgaaaaactgaacgttcacgatcaggttctgacg
tacaaacaagttgaaaacagcttcactcagccaaacggcgaagttgcgcagaaaatgctg
gaatgggccgttgactgcacccaagacagcgatggcgacctgctggagctgtactgcggc
aacggcaacttttcgctggcactggccaagaactttgaccgcgtgctggcgaccgaacta
gcaaagccgtccgttgactctgcacagtacaacattgcggtaaaccagattgagaacgtg
caaatcatccgtatgtcagcggaagagttcaccgaagcgatggaaggccgccgcgagttt
cgccgcctgaaagatcagggcattgatctgcagagctacaactgcaacaccatcttcgtc
gatccgccgcgttcgggcatggatgaaggcacatgccgtatggttcagggctatgagcgt
atcatgtacatttcctgcaacccggacaccctgaaagagaacctggagatccttggcgag
acgcaccgcattacgcgctttgccctgtttgaccagttcccttacacccatcacatggaa
gccggtgtactgctagagcgcaaataa
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