Photobacterium ganghwense: FH974_15430
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Entry
FH974_15430 CDS
T07175
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pgh
Photobacterium ganghwense
Pathway
pgh03420
Nucleotide excision repair
pgh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pgh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FH974_15430 (uvrD)
03430 Mismatch repair
FH974_15430 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgh03400
]
FH974_15430 (uvrD)
Enzymes [BR:
pgh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FH974_15430 (uvrD)
DNA repair and recombination proteins [BR:
pgh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FH974_15430 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
FH974_15430 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
HTH_TIMELESS
LANC_like
Motif
Other DBs
NCBI-ProteinID:
QSV14019
LinkDB
All DBs
Position
1:complement(3405234..3407405)
Genome browser
AA seq
723 aa
AA seq
DB search
MDVSLLLDGLNDKQREAVAAPLGNYLVLAGAGSGKTRVLVHRIAWLMGIEQASPYSIMSV
TFTNKAAAEMRGRINDLMHGSLSGMWNGTFHGLCHRMLRAHYLDAGLPEDFNILDSDDQM
RLLRRLIKAQNLDEKQWPARQAAWYINGKKDEGLRPQHIDTFNDPIEQTWLRVYHAYQEA
CDRAGMVDFAELLLRSFELLQRSKHIREHYQARFKHILVDEFQDTNNIQFAWLRLMAGPD
CHVMIVGDDDQSIYGWRGAKVENIQRFLNDFKDAKSIFLEQNYRSTGNILKAANGLIANN
NERMGKNLWTEGTEGELISVYSAYNELDEARFVVGKIREWQDQGGALADTAMLYRSNAQS
RVLEEALIQAGMPYRIYGGMRFFERQEIKDALSYLRLIANRHDDASFERVVNTPARGLGE
RTLETIRLAARDRGATMWQASVALLEEQVLAGRAANSLRRFIELVNALEDDTRELPLFQQ
TDEVIRNSGLRAMYEQEKGEKAQARIENLEELVTATRQFEVPEEAEDMSPLSAFLSHAAL
EAGEGQADDFEDAVQLMTMHSAKGLEFPMVFMVGVEEGMFPSSRTTEEVGRLEEERRLCY
VGMTRAMQKLYITYAEMRRLYGKDNYHKPSRFIREIPEEHIEEVRMKAKVSRPASSGRFS
QTQVNENFNQTGFSLGQRVLHPKFGEGTIINFEGSGAQSRVQVAFNGEGIKWLVTQFAKL
EPM
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcacttctgttagatggcctgaatgacaaacaacgcgaggctgtggcggcc
ccgctgggcaattatctggtgctggccggggccggtagtggcaaaacccgggtactggtc
catcgtatcgcctggttgatggggattgagcaggcgtcgccgtactccatcatgtcggtg
accttcaccaacaaagcggcggcagaaatgcgtggccggattaacgacctgatgcacggc
tcgctgtcgggcatgtggaacggcacgttccacggcctgtgtcaccggatgctgcgtgcc
cactatcttgacgccgggttaccggaagatttcaacattctggactcggacgatcagatg
cgcctgttgcgccgtttgatcaaggctcagaacctggacgagaaacagtggccggcccgt
caggcggcgtggtacatcaacggcaagaaagacgaagggttgcgtccgcagcacatcgat
acgttcaacgatccgatcgagcagacctggttgcgggtctaccatgcctatcaggaagcc
tgtgatcgggccgggatggtcgattttgccgagctgctgctgcgctcgtttgagctgctg
caacgcagtaagcatatccgcgagcactaccaggcgcgcttcaagcacattctggtggac
gagtttcaggataccaacaacattcagtttgcctggctgcgcctgatggcggggccggac
tgtcacgtgatgatcgtgggcgacgatgaccagtccatctacggctggcggggcgctaag
gtggaaaatatccagcgtttcctcaacgacttcaaagacgccaaatcgattttcctggag
cagaactaccgctcgacaggcaatatcctgaaggcggcgaacggcctgattgccaacaac
aacgagcgcatgggtaaaaacctgtggaccgaaggtaccgaaggggagctgatctcggtt
tactcggcgtacaacgagctggacgaagcccgctttgtggtcgggaaaattcgcgagtgg
caggatcagggcggcgcgctggctgacactgcaatgctgtaccgcagcaacgcccagtcg
cgggtgctggaagaggcactgattcaggccggtatgccgtaccgcatttacggcgggatg
aggttcttcgagcgtcaggaaatcaaagatgccctgtcgtatttacgtctgattgccaac
cgccacgacgatgcctcgtttgagcgggtggtgaacaccccggctcgggggctgggtgag
cggacgctggaaaccattcgtctggcagcgcgtgaccggggagccacgatgtggcaggcc
agtgtcgcgctgctggaagagcaggtgctggcggggcgtgcggccaattcgctgcgccgt
ttcatcgagctggtcaatgcgctggaagatgacacccgcgagctgccgttgttccagcaa
accgatgaggtgatccgcaactccggcctgcgggcgatgtacgagcaggaaaaaggcgag
aaggcgcaagcccggattgaaaacctggaagagctggtaaccgcgacccgacagttcgaa
gtcccggaagaagcggaagacatgagcccgttgtcggccttcctgtcgcatgcggcgttg
gaagccggtgaaggacaggcggatgattttgaagacgcggttcagctgatgaccatgcac
agcgccaagggattggaattcccgatggtctttatggtcggggtggaagaaggcatgttc
ccgagcagtcggacgacggaggaagtcggccgtctcgaggaagagcgccgtctgtgttac
gtggggatgacccgggcaatgcagaagctgtatatcacctatgcagagatgcgtcgcctg
tacggcaaggacaactaccacaagccgtcgcgttttatccgcgaaatcccggaagagcac
atcgaagaggttcggatgaaggccaaggtctcgcggccggcgagcagcggtcgcttcagt
cagacccaggtcaacgagaactttaaccagactggtttcagccttggccagcgggtgctg
cacccgaaattcggcgaaggcaccatcatcaactttgaaggcagtggtgcccagagtcgg
gtgcaggtggcctttaatggcgaagggatcaaatggctggtaacgcagtttgccaagctg
gagccgatgtaa
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