Photobacterium ganghwense: FH974_15470
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Entry
FH974_15470 CDS
T07175
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
pgh
Photobacterium ganghwense
Pathway
pgh00300
Lysine biosynthesis
pgh00470
D-Amino acid metabolism
pgh01100
Metabolic pathways
pgh01110
Biosynthesis of secondary metabolites
pgh01120
Microbial metabolism in diverse environments
pgh01230
Biosynthesis of amino acids
Module
pgh_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pgh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FH974_15470 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FH974_15470 (dapF)
Enzymes [BR:
pgh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
FH974_15470 (dapF)
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GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
QSV14026
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All DBs
Position
1:complement(3412570..3413400)
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AA seq
276 aa
AA seq
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MQFNFSKMHGLGNDFMVVDCVTQNVFFSPDAIRRLADRHRGVGFDQLLVVEPPYDPETDF
HYRIFNADGSEVEQCGNGARCFARFVWLKGLTNKYHISVSTKAGKMVLKLENDNQVTVNM
GVPEFEPGKIPFRAKQSEKTYLLRAGTQTLFCGAVSMGNPHCVTVVDDVDTFDVETLGPL
LESHERFPERVNAGFMQILNRNEVRLRVYERGAGETQACGSGACAAVAVGRMQGLLDERV
TVSLPGGELQIRWAGEGKPLYMSGPATHVYDGQIAL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttaatttttccaaaatgcatggcctggggaacgacttcatggtcgtcgactgt
gtgacccagaacgtgttcttctcgccggatgcgatccggcgtctggccgaccgccatcgc
ggggtcggttttgaccagttgctggtggtggagccgccttatgatccggaaacggatttc
cattaccggattttcaatgctgacggcagcgaagtggagcagtgcggcaacggtgcccgc
tgtttcgcccgttttgtctggctcaaaggactgaccaacaaataccatatttcggtcagt
accaaggcgggcaaaatggttctgaaactggaaaacgacaaccaggtgaccgtgaacatg
ggcgtgccggaatttgagccggggaaaatcccgttccgtgccaagcagagcgagaaaacc
tacctgctgcgggctggcacccagaccctgttctgtggcgcggtcagcatgggtaaccca
cattgcgtcacggtggtggatgatgtggatacctttgatgtcgaaactctcgggccgctg
ctggaatcccacgaacgcttcccggagcgggtaaatgccggctttatgcagatcctcaac
cgcaatgaagtacggttgcgggtctacgaacgaggcgctggtgaaactcaggcctgtggc
agcggtgcctgtgcggcggttgccgtgggccgaatgcagggattactggacgagcgggtg
actgtctcactaccgggcggggaattgcaaatccgttgggctggtgaaggcaaaccgctg
tatatgtccggcccggccacccatgtgtacgacgggcaaattgcgttatga
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