Photobacterium ganghwense: FH974_15475
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Entry
FH974_15475 CDS
T07175
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pgh
Photobacterium ganghwense
Pathway
pgh00300
Lysine biosynthesis
pgh00470
D-Amino acid metabolism
pgh01100
Metabolic pathways
pgh01110
Biosynthesis of secondary metabolites
pgh01120
Microbial metabolism in diverse environments
pgh01230
Biosynthesis of amino acids
Module
pgh_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pgh00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
FH974_15475 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
FH974_15475 (lysA)
Enzymes [BR:
pgh01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
FH974_15475 (lysA)
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Paralog
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
DUF1955
Motif
Other DBs
NCBI-ProteinID:
QSV14027
LinkDB
All DBs
Position
1:complement(3413416..3414669)
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AA seq
417 aa
AA seq
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MDYFNYQQDGQLWAEEIQLSELAERFGTPLYVYSRATLERHWHAFDRAVADHPHLICYAV
KANSNLGVLNVLARLGSGFDIVSGGELERVIAAGGDPAKVVFSGVGKTAAEMKRALELGI
KCFNVESEPELDRLNQVAAELGKVAPISLRINPDVDAQTHPYISTGLRDNKFGIAFERAP
EVYRLAQSLPNIAVTGMDCHIGSQLTALAPFIDATDRLLALIATLKAEGITIAHLDVGGG
LGVTYSDEQPPQPSEYARALMDRLTDHPELELIFEPGRAIAANAGVMLTRVEYLKHTEHK
NFAIVDAAMNDLIRPTLYQAWQEIIPVIPRDGEAVTYDLVGPICETGDFIGKDRRLCLET
GDLLAVRSAGAYGFVMASNYNTRTRAAEIMVDGKDAHVVREREELTQLWQSEHLLPA
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
ttggattattttaactaccagcaagacggccaactgtgggccgaagagattcagctttcc
gaactggctgagcgttttggcactccgctgtacgtgtattcgcgcgctacgctggagcgt
cactggcatgcgtttgatcgggccgtggctgatcatccgcacctgatctgctatgccgtg
aaggccaactccaaccttggcgtgctgaatgtactggcccgcctgggttccgggtttgat
atcgtgtccggcggtgaactggagcgtgtgattgccgcaggcggcgacccggcgaaagtg
gtgttttccggtgtagggaaaaccgccgcagaaatgaagcgcgccctggagctgggaatt
aagtgtttcaatgtcgagtcggagccggagctggatcgcctgaaccaggtggcagcggag
ctgggcaaagtggccccgatttccctgcggattaacccggacgttgatgcacagactcac
ccgtacatttcgaccgggctgcgtgacaacaaattcggtatcgcgtttgagcgtgcgccg
gaggtgtatcgtctggcgcagagcctgcctaatattgctgtaaccgggatggactgccac
attggctcgcagctgaccgcactggcaccgtttattgatgccaccgatcgcctgctggcg
ctgatcgcgaccctcaaagcagaaggcattaccattgcccaccttgatgtcggtggcggc
ctgggcgtgacttacagtgacgaacaaccgccgcagccgtcggaatatgcccgtgccctg
atggatcgtctgaccgaccatcctgagctggagctgatttttgagccgggccgtgccatt
gctgccaatgccggggtgatgctgacccgggtggaatacctcaaacataccgaacataaa
aactttgccatcgtggatgcggcgatgaatgacctgatccgcccgaccctgtatcaggcg
tggcaggagattatcccggtgatcccgcgtgacggcgaagccgtgacctacgatctggtg
ggcccaatctgtgaaaccggtgatttcatcggcaaagaccgccgactgtgtctggaaacc
ggcgatctgctggcggtacgttcggccggtgcctacggttttgtgatggcgtcgaactac
aatacccgcacgcgtgccgccgaaatcatggtcgacggcaaagacgcgcacgtggtacgc
gaacgtgaagagctgacccagttgtggcagtccgaacacctgctgccggcgtaa
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