Photobacterium ganghwense: FH974_19010
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Entry
FH974_19010 CDS
T07175
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
pgh
Photobacterium ganghwense
Pathway
pgh00630
Glyoxylate and dicarboxylate metabolism
pgh00680
Methane metabolism
pgh01100
Metabolic pathways
pgh01120
Microbial metabolism in diverse environments
pgh01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
pgh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
FH974_19010 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
FH974_19010 (fdhF)
Enzymes [BR:
pgh01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
FH974_19010 (fdhF)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Pyr_redox_2
Molydop_binding
Fer4_20
Molybdop_Fe4S4
Pyr_redox
Pyr_redox_3
Fer2_4
Fer4_7
NAD_binding_8
Fer4
Fer4_6
Fer4_8
DAO
Fer4_9
Fer4_16
NADH-G_4Fe-4S_3
Fer4_2
Thi4
NAD_binding_7
FAD_binding_2
FAD_binding_3
Fer4_18
HI0933_like
Fer4_10
Fer4_21
FAD_oxidored
MurD-like_N
Amino_oxidase
Fer4_15
Fer4_3
Fer4_Nqo3
SET_assoc
Fer4_22
Motif
Other DBs
NCBI-ProteinID:
QSV17036
LinkDB
All DBs
Position
2:677963..682156
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AA seq
1397 aa
AA seq
DB search
MHVTIDGQVLSADNQQTILEVAQANGIEIPSLCGLNKNGEKVPCGLCVVEVAYQHEHHQA
SLQSTITTVRACEVVPEPGMTIRTHSEALSTQRQQALKRILSDHYADCLAPCQTACPAGV
DIQSYLYHISQNDHQKAVEVIKRTLPMPLSIGRVCPAFCEAECRRGIVDEPVAIRQLKRH
AADCDLEAQEQYIPPRKADKGKRIAIVGSGPGGLSCGYYLSIEGYNVTVLESMPQPGGWL
RYGIPEYRLPKAILDKEIELMCRNGMTIQTNTALGKDMPLTALIEQYDAVCLAVGASKAV
AMTYPGSDLDGCYLGVDYLKDFVTDKTYTTGQKVAVIGGGNTAIDCARTAIRAGADTTLI
YRRTRDEMPAEDYEIVEAEHEGVKFHFLTNPVENLADETGRVNAVKLEKMALGEPDASGR
RRPEPTGEYVTEAFDTVIAAVSQQPDLSFLEQAGIELPVTRWQTVDADSRSLYTGVANVF
SIGDLRRGPATAIEAVADGRLAAEAINRFLQGQSVTAAVAPFDAKKASRVKDIDLTQYTA
IQKAVRAVMPELSANERQGSFAEVETGFSTSDAMVEAARCLECGCQANTDCQLRDYATEY
GVQREELDTADCQKFVVDNSAEFIVFDANRCISCGQCVAACNEQAVHGVLSFSRNPDGSG
ASRPECRPGFEQGYSMGDSACVQCGACVQVCPTGALVDARDKSQGRIEMLKPTETICTYC
GVGCKVTLFVDESRNQIRYVQGAKDSPVNQGMLCVKGRFGFDFIHSKERLTQPLIRQNGE
LQPASWDEAIELVASKFNRIKTLFGGNALAGFSSAKTTNEDNFAFQKFIRRELGTNNVDH
CARLCHASTVTGLEASLGSGAMTNDIPSIAHSDLIFIIGSDTTAAHPIIASHIKQAIRKG
TARLVVADPKRVDIADHAELYVAQRPGTDVMLLNGIMQQILVNGWHSEHYLHERVTGFEA
FEAEVMRDAYSPERVELVTGVKQADLMRLAEMIGQAKHTAVYYAMGITQHTTGHDNVRAI
ANLQLLCGNIGVEGGGINPLRGQSNVQGACDMGALPDNFPGYQKVTNPEVHQKFAQAWNC
SDLPDQPGLTLTEIIDAACQKQVRGLYVMGENPVLSDPDQHHVLQGLHALDFLVVQDIFL
TETAQLADVVLPSFAFAEKSGHFTNTERRVQRLQPAVKAPGEAREDWQIIQSIANAMGSD
WQYHSVADITREINQLTPQYAGITWERVGPDGLQWPCPHEDHPGTRVLHQDTFVRGKAEM
VVTPFRYAAEMPDADFPLVLTTGRLLEQFHTGTMTRKTKGLDNLAGPRAMISVVDAEKIG
ITNGEMIRLVTRRGSIEAPAFVTKRMQPGVVFTPFHFAESAANKLTISATDPHAKIPEFK
VAAVRVEKLSQTEVVAC
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtcactatagacggacaagtgctgtcagctgacaaccaacagacgattcttgag
gtcgctcaggcgaacggcattgagattccatctctgtgcggattaaacaaaaacggggaa
aaagtgccttgcgggctgtgcgtggtcgaagtcgcgtaccagcatgaacaccatcaggct
tctcttcagtccaccataactaccgttcgtgcctgtgaagttgttccggagccgggtatg
acgattcggactcatagcgaagcattgagcacacaacgccagcaggcactgaaacgtatt
ttgtctgatcattatgccgattgcctggccccgtgtcagacggcttgtccggccggcgtc
gatattcagtcctacctgtatcacatttcccagaacgatcatcaaaaagcggtagaagtt
atcaagcgcaccctaccgatgccgctttctattggccgtgtgtgcccggcattttgtgaa
gcggaatgccgccggggcattgttgatgagccggtggcaattcgtcagcttaaacggcat
gcggcagactgcgatctggaagcgcaggagcaatatattccaccacgtaaggcggataag
gggaagcgtattgcaattgttggtagtggccctggcgggttgagctgcggctattacctg
agcattgaaggttacaacgtcactgtgttggagtcgatgccgcagcccggcggatggctg
cgatatgggattccggaataccgcttaccgaaagcgattctcgacaaagaaattgaactg
atgtgccgcaacgggatgacgattcaaaccaatacggcactgggcaaagacatgccgctg
acagcactgattgagcaatatgacgcagtgtgtcttgcggtcggcgcgtcgaaagcggtg
gcaatgacctatcccggcagtgatttggatggttgctatcttggggttgattaccttaaa
gattttgtcaccgacaaaacttacaccaccggacagaaagtggcagtgattggaggagga
aacaccgcgattgactgtgcccgcacggcgataagagccggtgccgacaccacgctgatt
tatcgccgtacccgggatgaaatgccggctgaagactatgagattgtcgaagcggagcat
gaaggggtgaaattccactttctgacaaacccggttgagaacctggcggatgagactggt
cgggtcaacgccgtaaaactggaaaaaatggcgttgggggagccggatgcatcgggacgc
cgccgacctgagccaaccggtgagtatgttactgaagcgtttgataccgtaatcgccgct
gtttctcagcaacctgatctcagttttctggagcaggctggcattgaattacccgttacg
cgttggcaaaccgtggacgcggattcacgctctttgtataccggtgtggcgaacgtcttc
agtatcggtgacttacgacgcgggccggcgaccgccattgaggccgtcgctgatgggcga
ctggccgccgaagcgataaaccggttcctgcaagggcagtccgtgacggctgctgtcgcc
ccttttgatgctaagaaagcatcgcgggtaaaagacatcgatctgacgcaatatactgcc
attcagaaagcggtgcgtgcagtaatgccggagttgtctgccaatgagcggcaggggagc
tttgccgaagtggagacaggcttttctaccagtgatgcaatggtggaagcggcacgctgc
cttgagtgtgggtgtcaggcgaataccgactgccagttgcgggactatgcgacggaatac
ggggttcagcgcgaggagctggataccgctgactgccagaaattcgtcgtggataatagc
gcagagtttatcgtgttcgatgccaaccgctgtatcagctgtggccaatgtgtggctgcc
tgtaacgagcaggcggtacatggtgttttgagtttttcccgcaacccggatggctctggt
gcgagcagaccggaatgccgtcccggttttgaacagggatacagcatgggtgattcggcc
tgcgtacagtgcggggcttgcgtgcaggtgtgtccgaccggagcgctggtggatgcgagg
gataaatcgcaggggcggattgagatgctaaagccgacagaaaccatctgtacctattgt
ggcgtcggctgcaaagtgactctgtttgtcgatgaaagccgaaatcagatccggtatgtg
caaggggctaaagactctccggttaatcagggaatgctctgtgtgaaaggccggttcggt
tttgattttattcacagcaaagagcgcctgacccaacccttaattcgtcaaaacggtgag
ttgcagcctgccagttgggatgaggccattgagctggtggcgagtaagttcaaccgaatc
aaaaccttgtttgggggcaatgccctggcgggattctcatcggccaaaaccaccaacgaa
gataactttgcgttccagaagtttatccggcgtgagctgggtactaacaatgtcgatcat
tgtgcccggctgtgtcatgccagtacggtgactgggctggaggcatcgctgggcagcggg
gccatgaccaatgatattccgagtattgcccattcggatctgatctttatcattggctcg
gataccacagcagcgcacccgatcatcgcatcacatatcaagcaggcgattcgcaagggc
actgcgcgtctggtcgtggccgatccaaaacgggtagacattgccgatcatgctgagttg
tatgtggcacagcgtcccggaaccgatgtgatgctgctgaatggcattatgcagcagatt
cttgtgaatggctggcacagtgaacactatctccatgagcgtgttacgggctttgaggcg
tttgaagctgaagtgatgcgtgacgcttattcgccggagagagtggaactggtgactggt
gtgaaacaggcagacctgatgcggctggccgaaatgatcggacaggcaaagcacacggca
gtgtattacgccatgggtattacccagcacacaacaggtcacgacaatgtgcgggccatt
gccaacctgcagctgctgtgcggcaatattggggttgaaggcggaggcattaacccgctg
cgagggcagtcaaatgtgcagggcgcctgcgatatgggagctttgccggacaatttcccg
ggttatcagaaagtgaccaatccggaagttcatcagaaatttgcacaggcatggaattgc
tctgacttgccggatcaaccggggttaacactgacggaaatcattgatgcagcctgccag
aagcaggtgcgtggtctgtatgtgatgggggagaacccggtactcagtgatccggatcag
caccatgtactgcaagggctccatgcgcttgattttctggtggtgcaggacattttcctg
actgaaaccgctcagctagccgatgtcgtgctgccttctttcgcctttgcggagaaatca
ggccatttcaccaacactgaacgtcgtgttcaacggctccaaccggctgtaaaagcgccg
ggagaagcgagagaagactggcagattattcagtctattgcgaatgccatgggcagtgac
tggcaatatcactccgtggcggacattactcgtgaaatcaaccagttgactccgcaatat
gccggaattacctgggagcgtgtcggccctgatggcttgcaatggccatgtccgcatgaa
gatcatccgggtacccgagtgcttcatcaggacacatttgtgcggggcaaggctgaaatg
gtggtgacgccgttccgttacgcggcagaaatgccggatgccgatttcccattggtgctg
acgacaggtcgtctgctggaacaattccataccggtacaatgacccgtaaaaccaaaggc
ttggataatctggccggaccgcgggcgatgatttcagtcgtggatgctgagaagataggg
attacgaacggcgagatgattcgcctggtgacccgtcgtggcagtattgaagccccagca
tttgtcacgaaacggatgcagcccggtgtggtgtttacgccattccactttgcggagtct
gcggcaaataaattgaccatttcagcaaccgatccccatgccaagatcccggaatttaaa
gtggctgccgtcagggtcgagaaactgtcacaaacagaagtcgtggcgtgttag
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