Photobacterium ganghwense: FH974_20440
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Entry
FH974_20440 CDS
T07175
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
pgh
Photobacterium ganghwense
Brite
KEGG Orthology (KO) [BR:
pgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgh03021
]
FH974_20440 (rpoS)
Transcription machinery [BR:
pgh03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FH974_20440 (rpoS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
QSV17299
LinkDB
All DBs
Position
2:complement(974284..975159)
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AA seq
291 aa
AA seq
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MDIKSQDMNGFDADVIHLYLQEIAHKPLLSKTEEILYSRKSLVGDLAAKATMIESNLRLV
VSIAKKYRNSGMLLSDLIDEGNIGLITAVEKFDPERGFRFSTYATWWIKQTIERAIHNQA
RTIRLPVHVSKEINTILRTYRQLMKQTNQEPTHEEVAAKLQRSVDEISSVLAYDAPVVSI
DQQISEDSNSQTISAFIADHDGGKPDSEMDQDDITRLATTMLDSLNARDREILCRRFGLL
GYEAQTLQEVADEVGLTRERIRQLQVSSLKKLKNALCRENYDLEVLFAETA
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggatatcaaatcacaagatatgaatggctttgatgctgacgtaatccatctgtatctt
caagaaattgcgcacaaaccgctcctttccaagaccgaagaaatcctgtacagccgaaaa
agcctggttggtgatctggcggccaaagcaacaatgattgaaagtaatttgcgcctggtg
gtcagtatcgcgaagaagtaccgtaacagcggtatgttattgagtgatctgattgatgaa
ggaaacattggcctgatcactgctgttgaaaagtttgacccagagcgtggattccgcttt
tctacgtatgcgacttggtggatcaaacaaactattgagcgtgctatacacaatcaagcg
cgtactattcgcctgcctgtgcatgtctcaaaagaaatcaacaccattcttcgtacatac
agacaattgatgaagcagaccaatcaggagccaacccacgaagaagttgcggcaaaactg
cagcgttctgttgacgaaatttcaagtgtactggcttacgacgcccctgttgtgtcaatt
gaccaacaaatctcagaggacagtaactcacagactatatctgcattcattgcagatcat
gacggtggtaaacccgacagcgagatggatcaggatgacattacacgtttggcgacaacc
atgttagatagcctgaatgctcgtgatcgggaaatactgtgccgccggtttggtttactg
ggatacgaagctcaaacacttcaagaggttgccgatgaagtcggattaacccgcgagcgg
attcgtcagcttcaggtaagttcattgaaaaaactcaaaaatgcactttgtcgtgagaac
tatgacctagaagtgttgttcgcagaaacagcgtaa
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