Photobacterium ganghwense: FH974_22340
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Entry
FH974_22340 CDS
T07175
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
pgh
Photobacterium ganghwense
Pathway
pgh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FH974_22340 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pgh03019
]
FH974_22340 (groL)
03110 Chaperones and folding catalysts [BR:
pgh03110
]
FH974_22340 (groL)
03029 Mitochondrial biogenesis [BR:
pgh03029
]
FH974_22340 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pgh04147
]
FH974_22340 (groL)
Enzymes [BR:
pgh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
FH974_22340 (groL)
Messenger RNA biogenesis [BR:
pgh03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
FH974_22340 (groL)
Chaperones and folding catalysts [BR:
pgh03110
]
Heat shock proteins
HSP60 / Chaperonin
FH974_22340 (groL)
Mitochondrial biogenesis [BR:
pgh03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
FH974_22340 (groL)
Exosome [BR:
pgh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
FH974_22340 (groL)
Exosomal proteins of other body fluids (saliva and urine)
FH974_22340 (groL)
Exosomal proteins of breast cancer cells
FH974_22340 (groL)
Exosomal proteins of colorectal cancer cells
FH974_22340 (groL)
Exosomal proteins of bladder cancer cells
FH974_22340 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
NNH2
Motif
Other DBs
NCBI-ProteinID:
QSV15982
LinkDB
All DBs
Position
2:complement(1356553..1358148)
Genome browser
AA seq
531 aa
AA seq
DB search
MTAKDVLFADDARQKMLKGVNLLADAVKVTLGPKGRNVILDKSYGAPTITKDGVSVAKEI
ELRDKFENMGAQMVKQVASKANDEAGDGTTTATVLAQSFINEGLKAVASGMNPMDLKRGI
DKAVDAAVEKLREMSQPCSDKESITQVGSISANSDREIGEIIAEAMEKVGRNGVITVEEG
QGLKNELSVVEGMQFDRGYLSPYFITNQDAGSVELDNPYILLVDKKVSNIRELLPVLEAV
AKSGRSLLIIAEDIEGEALATLVVNNMRGIVRATAVKAPGFGDNRKAMLGDIATLTAGTV
ISEEIGLELEKATLEQLGSATKVTITKDTTTIVGGAADEDAIKDRVASIEKALENTTSQY
DKEKLQQRIAKLSGGVAVIKIGAATEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALT
KIAKELAELKGDNDDQNVGIRVALRAMEEPLRQIATNAGDEASVVANAVKAGDVHYGYNA
ATGEYGNMIEMGILDPAKVTRSALQFAASVAGLMITTEAMVTDHVADKEER
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atgactgcaaaagacgttttatttgctgatgacgcacgtcaaaaaatgctgaaaggggtg
aatttgctggcggatgcagtgaaggttactctgggtcctaaaggacgtaatgtcatactg
gacaaatcctacggtgcgccgaccattacaaaagatggcgtctctgttgcgaaagagatc
gaactgcgagacaagttcgagaacatgggcgcacaaatggtgaaacaagtcgcctccaaa
gccaacgacgaagcaggtgacggtactaccaccgcaaccgtactggctcagtctttcatt
aacgaaggtttgaaagcggtggcgtctggtatgaacccaatggacctgaaacgcggtatc
gacaaagcagttgatgcggcggttgaaaagctgcgtgaaatgtcacaaccgtgcagcgat
aaagagtctatcactcaggtcggtagcatttctgcaaacagtgaccgtgaaattggtgaa
atcattgctgaggccatggaaaaagtggggcgcaacggtgtaattaccgttgaagaaggt
caggggctgaagaatgaactgtctgttgttgaaggtatgcagttcgaccgtggctattta
tcgccatatttcattaccaatcaggatgccggttctgttgagttggacaatccgtacatc
ctgctggtggacaaaaaagtcagcaatattagggaattgttgccagtactagaagccgta
gctaaatctggccgttcactgttgattattgccgaagatattgaaggcgaagcactggca
acgctggtggtgaacaacatgcgcggtattgttcgtgcgactgcggtgaaagcgcctggc
tttggtgacaaccgtaaagcgatgctgggtgatatcgctactctgactgccggtacggta
atttcagaggaaattggcctcgagctggaaaaagcaacgctggagcaattgggtagcgca
acgaaagtcaccatcacgaaagacaccacaaccatcgttggtggtgccgcagatgaagat
gccatcaaagatcgtgttgcctcgattgagaaagcgttggaaaacaccacttctcaatac
gacaaagaaaaactgcaacagcggattgccaaactgtctggcggcgtcgccgtgattaaa
atcggggctgcgacagaagtcgagatgaaagagaagaaagaccgcgtagatgatgcactt
catgcaacccgtgctgcggttgaggaaggtattgttgccggtggtggtgttgcattgacc
aagattgctaaggaactggcggaactgaaaggtgataacgatgaccagaatgtgggtatt
cgtgttgccctgcgtgccatggaagaaccactgcgtcaaattgccaccaacgcgggtgat
gaagcatctgttgtggcgaatgccgtaaaagcgggcgatgtccattacggctataacgcg
gcaacgggtgaatacggcaatatgattgagatgggtattcttgatcctgcaaaagtcact
cgttcagcactgcagttcgcggcctctgtggcggggttaatgatcaccaccgaagctatg
gtcaccgatcacgttgcagacaaagaggaacgctaa
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