Photobacterium ganghwense: FH974_23475
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Entry
FH974_23475 CDS
T07175
Name
(GenBank) right-handed parallel beta-helix repeat-containing protein
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
pgh
Photobacterium ganghwense
Pathway
pgh00040
Pentose and glucuronate interconversions
pgh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pgh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
FH974_23475
Enzymes [BR:
pgh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
FH974_23475
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pel9A-like_beta_helix
Beta_helix
Chondroitinas_B
Motif
Other DBs
NCBI-ProteinID:
QSV16188
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All DBs
Position
2:1623191..1625416
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AA seq
741 aa
AA seq
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MKPSTLALCLAAALSSQAYAQVPDANQLVWKATTFGQSTDLNFGSTILPDKVGVNQVTIN
GQAVQPGPVADSVTIESRGGKLANSHEGLTFYYTELPTDVNFTLSADITLEQLGPETGAT
PNRQEGAGIMVRDILGAERQVPQPEGHEEFPSASNMVMNLLRSHTRDNDGMVNINGSYRE
GVYQPWGTAGNRLSRVDYLEGVPYGAEHTYRMSLTRTDNGFTVSYGQGEEAQSYEVKGAN
ANIVEMQNPDSQFIGFFASRNAKVTVSNVDLALSPANTIDAPKFAAKATPLVFELASSAQ
SATSLYPVQARANYTGVFTVQHNGKTVAEQQVAAGELFSQPVTLADGDNTFAVQFTALEG
PNRTPKTERFSVTHVALDNPMTLYVSPKGQPTGNGSESQPLDLATAITVLPAGGTIVLAD
GDYPAITLPLSASGTAEQPKHLVAGGDNARFTGEVLHQAHYWQLKGIEVAGASLIVHGSH
NRFDHIVTHSAPDTGFQITSPENIGRALWASYNTVTDSESYNNMDASQINADGFAAKMRI
GDGNTFVRCLSHHNVDDGWDLFNKVEDGPNGVVTILDSIAFNNGQTLSVKAKGGTRGNGF
KLGGEGMPVAHVIRNSLAFNNSMDGFTDNFNPGSLEVSNNTAIDNKRFNYLFRKSPYASD
IPQGTFTENSSYRFHVPSQYDDVIHSYLAKDNVFIVDGHSASEEHSLPVARLKALKQASA
VDDDSAIPGKKEALALKALLQ
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccatcaactttagccctgtgtctggcggccgccttatcttctcaggcttacgca
caggttccagacgcaaaccagctggtgtggaaagcaaccacatttggccagtcgacggat
ctgaacttcggttcgacaattctgccggataaagtcggcgtcaatcaggtcacgatcaac
ggacaggccgtacagcctggcccggttgcagacagtgtgaccattgaaagccggggcggt
aaactggcgaactcccacgaaggactgacgttctattacacggaactgccgaccgacgtg
aactttacgttgtctgccgatattactctcgagcagcttggcccggaaaccggcgcgaca
cccaatcgccaggaaggtgccggcataatggttcgcgacattctcggggctgaacgtcag
gttccacaaccggaaggccatgaagaattcccgtcagcatccaatatggtcatgaacctg
ctgcgttcccatacccgtgataatgatggcatggtaaacatcaatggatcataccgggaa
ggcgtctatcagccgtggggcactgctggtaatcgcctcagccgggtggactatctggaa
ggagtgccgtacggggcagaacacacttaccgaatgagcctgacacgcaccgacaatggg
tttaccgtcagctatggccaaggcgaggaggcacagtcctatgaagtcaaaggggccaac
gccaatattgttgagatgcaaaacccggacagccagttcatcggcttctttgcctcccgc
aacgctaaagtcacggtgagcaatgttgatctggcgctatcaccagccaacaccattgat
gcgccaaagtttgcggccaaagccacaccactggtttttgaacttgcctcttccgcgcag
tcagccaccagcttgtacccggtgcaggcgcgagccaattacaccggggttttcacagtc
caacacaacggcaaaaccgttgccgagcagcaggtcgcagcgggtgaactattcagccag
ccagtgactcttgctgatggcgataatacgtttgccgttcagtttactgcgctggaaggg
ccaaaccgcacgcctaaaacagagcgtttcagcgttactcacgttgcactggacaatccg
atgacgctctatgtcagtccgaaaggtcagccgaccggaaatggctcggaatcgcagccg
ctggatttagccaccgcgatcacggtacttccggcaggcggcactattgtactggccgat
ggcgattacccggccattaccctgccgctatcagccagtggcacggcagagcagccaaaa
catctggttgcaggtggcgataatgcccgcttcacgggagaagtgctgcaccaggcccac
tactggcagttgaaagggatagaagttgccggagccagcctgattgtacacggcagccat
aaccgctttgatcatatcgtcacgcacagtgcaccggacactggtttccagatcacctca
ccggagaatatcggccgcgcgctctgggccagctataacacagtgactgacagcgaaagc
tataacaacatggatgcctcacagatcaacgccgacggctttgccgcaaaaatgcgaatc
ggtgatggcaacacctttgtaagatgtctgtcgcatcacaacgtggatgatggttgggat
ctgtttaataaggtcgaagacggcccgaatggcgtagtcacgattctggattccattgcc
tttaacaacggacaaacgctgagcgtgaaagccaaaggcggcacccgggggaacggcttt
aagctcgggggcgaaggaatgcctgttgcgcatgtcattcgtaacagcctggccttcaac
aacagtatggatggttttaccgataactttaaccccggctcgcttgaggtcagcaacaat
accgccattgataataagcggtttaattacctgttccgcaagagtccctatgccagtgac
atcccgcaggggacatttactgaaaacagctcttaccgcttccatgtgcccagccaatat
gatgatgtcattcacagctacctggcaaaagacaacgtcttcattgttgacggccactcc
gcatccgaagagcactcattaccggtagcacggctgaaagccctgaagcaggcgtcggct
gttgatgatgattcagcgataccgggtaaaaaagaagcactggccctgaaagccctgctg
caataa
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