Photobacterium ganghwense: FH974_23545
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Entry
FH974_23545 CDS
T07175
Name
(GenBank) collagenase
KO
K01387
microbial collagenase [EC:
3.4.24.3
]
Organism
pgh
Photobacterium ganghwense
Brite
KEGG Orthology (KO) [BR:
pgh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pgh01002
]
FH974_23545
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
pgh02042
]
FH974_23545
Enzymes [BR:
pgh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.3 microbial collagenase
FH974_23545
Peptidases and inhibitors [BR:
pgh01002
]
Metallo peptidases
Family M9
FH974_23545
Bacterial toxins [BR:
pgh02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
FH974_23545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M9
Peptidase_M9_N
PPC
Motif
Other DBs
NCBI-ProteinID:
QSV17470
LinkDB
All DBs
Position
2:1640482..1642932
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AA seq
816 aa
AA seq
DB search
MNMKKNLFRHSTLAVLIASGLLAQPVLAAPTCQINKINTAEQPFAVIERADNECRNDWFS
APPDTLNSLFSEATIQQAQQQLHRHVQGYRGEDVQALAIENLGEFIRAAYYVRYQHQRQY
GDYSEALDLSLAHTINTFLLSPYAALTGEQQIGALKSMTTMVDNIRQLPLTMANQLPLLD
HFTRQTADNLQFVEALNNLFRAMSGHISITTFYDDLAAHPKYLAQLHQFILTNDWALETR
ADFIVTNAAREMGRLLVTPHADTRQQVLTILEDLLHRYPLGGKSDKMWVGIAEMINYFAP
EKAAELGLTNAKRDLEASMMPLRFACDGPAIIRAQAMTEAQAAEVCHILADKEADFHQVA
ATGNQPVADDLNSTVEVVVFDSNADYVSYSNFLFGNTTNNGGQYLEGNPAEADNQARFIA
YRNEYADGYSILNLEHEYVHYLDGRFNLHGDFGDVLRHGHTVWWLEGFAEYMHYKQGYSD
AIALGRSQKYSLTEVLATTYDHDVNRIYRWGYLAVRFFMENHPGEVNSLLALSRQGQFRQ
WADTAKALGEQYNEEFRQWLLTVEDTGSNPDNPGEPEQPGGKDVSALAFNTPITLAGERY
SEHLFFIDVPQHTTSMKLAISGDGDADLFVSYNRVAHYYDYDETAFVDGSNELLSLTAEE
NGFIKPGRYYVSVTGREAFHAVTLTASAEINDPADQGNQQLPQGEDDLTPVVLQADQPQT
FKVHAQRYLAVPVSEAGQTVRVWVTPVNATESSSLSDVNLYAAQAHWPTTETHDRASAYS
GSQEYLELTADKAGYIHLLMTNQGHTAEVEVYVAVE
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
ataaacatgaaaaagaatttattcagacattcaacattggctgtgttgatcgcttcagga
ttattggcccagccggttctcgccgcaccgacctgccagataaacaaaatcaatacggcc
gaacaaccgtttgcagttattgagcgggcagacaacgaatgtcgtaacgactggttttca
gccccgccagatactctgaacagcttgttcagtgaagccaccattcagcaagcgcaacag
caacttcatcgccatgtccaaggctaccgaggcgaagatgttcaggcactggcgatcgaa
aacctgggggagttcattcgtgccgcctactatgtgcgttaccagcatcagcgccaatat
ggcgactattctgaggctctggacctgtctctggctcataccatcaatacgtttctgctt
tccccgtacgccgctctgaccggtgagcaacaaatcggcgcgctgaaaagcatgacaacc
atggtggataatatccgtcagttaccattaaccatggccaatcagttacctttactcgac
cactttacccgtcaaactgcagataatctgcagtttgtcgaggctctgaacaacctgttc
cgggcaatgagcgggcacattagcatcaccacgttttacgatgatctggccgcgcacccg
aaatacctggctcagttgcatcagtttatcctgaccaatgattgggcgctggagactcgt
gctgattttattgtgaccaatgccgcccgtgaaatgggacgcttgctggttacacctcat
gctgatacccgtcagcaagttctgactattctggaagacttactacaccgctacccactg
ggcggaaagagcgacaaaatgtgggtcggcatcgcggaaatgattaactactttgccccg
gaaaaagccgccgagctgggtctgactaatgctaagcgcgatctggaagcaagcatgatg
ccgctgcgttttgcctgcgacggcccggcgatcattcgcgctcaggcgatgacagaagcg
caggcagcagaggtttgccatatcctggcagataaagaagcggattttcatcaggtggca
gcgacaggcaatcagccggtggctgatgatttgaacagcacggtagaggtcgtggtattc
gacagcaatgcagattacgtcagctactccaatttcctgttcggtaacaccaccaacaat
ggtggtcagtatctggaaggaaacccggcagaggccgacaatcaggcccgctttattgcc
taccgcaacgaatacgctgacggttacagcatccttaacctggagcatgaatatgtgcat
tatctggatggacgctttaacttacacggcgatttcggtgatgtcctgcgccacggccat
acagtctggtggctggaaggttttgcggagtacatgcactacaagcaaggttacagcgat
gccattgctctgggtcggtcccagaaatacagcctgacagaagtactggctaccacttac
gatcacgatgtcaatcgtatctatcgctggggttatctggctgtccgcttttttatggaa
aaccacccgggtgaagttaactcgctcttggctctttcccgtcagggacagttccgccaa
tgggcagacaccgcaaaagcgctgggtgagcaatataatgaagagttccgtcaatggctg
ctcacggttgaagatacaggctcgaacccggataacccaggagaaccagagcagccaggt
ggcaaggacgtgtcagcactagcgttcaatacgccaatcaccctggcaggcgaacgatac
agcgagcacctgttctttattgacgttccacagcacaccaccagtatgaaactggccatc
tccggtgatggcgatgccgacctgttcgtcagctacaaccgtgtagcccactattatgat
tacgatgaaaccgcctttgttgatggcagtaatgaactgctatctctgacggcagaagaa
aatggctttatcaaaccgggtcgctactacgtgagcgtcactggaagggaagcattccat
gccgttaccctgactgcgtccgcagagatcaatgatccggccgatcaaggtaaccagcaa
ctaccgcagggtgaagacgatctgaccccagtggtattgcaagccgatcagccgcaaaca
ttcaaggttcacgcccagcgttacctggccgttcctgtttcagaggcaggccaaaccgtc
cgcgtctgggtgacaccagtcaatgccaccgaatcgtcttcactaagtgatgttaatcta
tacgccgctcaggctcactggccgaccaccgagacccatgatcgggcatcggcttactcc
ggcagtcaggagtatcttgaactgaccgcagacaaggctgggtatatccatctgctgatg
acaaatcagggccacactgccgaagtcgaagtatacgtcgcagtggagtaa
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