Photobacterium ganghwense: FH974_23945
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Entry
FH974_23945 CDS
T07175
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K02855
AraC family transcriptional regulator, L-rhamnose operon regulatory protein RhaS
Organism
pgh
Photobacterium ganghwense
Brite
KEGG Orthology (KO) [BR:
pgh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pgh03000
]
FH974_23945
Transcription factors [BR:
pgh03000
]
Prokaryotic type
Helix-turn-helix
AraC family
FH974_23945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
AraC_binding
HTH_11
Cupin_2
HTH_Tnp_ISL3
HTH_7
UPF0122
HTH_6
LacI
HTH_23
DUF6398
HTH_psq
HTH_24
HTH_1
HTH_20
Mga
Motif
Other DBs
NCBI-ProteinID:
QSV16269
LinkDB
All DBs
Position
2:1736986..1737792
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AA seq
268 aa
AA seq
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MFQLNCEDFFKTSDSTICTEIRSPQEAYPEHAHDFHELIIVTKGAGQHIINDVPTNLSQN
YICYLSPKDRHLYEQVDNLHLTNILFKKNKLAYSPLLKSMLPKDEDEQNSWFITAESMKK
VNLLLNQIEYESQHHTVDSRLMTEALFQQLVVELSRGRLSSASKNEADNSILKVIDWIQN
NYAEEISINTVADQFNVSSRTLSRRIKQITNLSFNNYVHRVRINNAMNLLHYSEQSITDI
AFQVGYKDSNYFSTKFKRFTNQTPSDFR
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaattaaattgtgaagactttttcaaaacgtctgacagtacaatttgtaccgaa
atacgctcgcctcaggaagcctaccctgagcatgctcacgattttcatgaacttattatt
gtgaccaaaggagctggtcagcatattattaacgacgtgccgactaatttgtcacagaac
tatatttgctacctttccccaaaagaccgtcatctgtacgaacaagtcgataacctgcat
ttgaccaatatcttgttcaagaaaaacaaactggcctactccccgctgctgaaaagcatg
ctgcccaaggatgaagacgaacaaaacagttggttcattactgccgagagcatgaaaaag
gtaaacctgttactcaaccaaattgagtatgaatcccagcatcacaccgtggattcacgg
ctaatgactgaagccttgtttcaacagttggtagtggaactctctcgtggccgattatca
tcagcctctaaaaacgaagcggataacagtattcttaaggtcatcgactggattcaaaac
aactatgcggaagaaattagcattaacacggtggcagaccagtttaacgtatcatcacga
acattgagccgccgcataaagcaaatcactaatctttcattcaataactacgttcaccgt
gtacgcatcaacaacgcgatgaacctgctgcactattcagagcagtcaatcactgacatc
gcctttcaggttggttacaaagacagcaattatttcagcaccaaattcaaacgctttacc
aaccagacaccgtcagattttcgataa
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