Photobacterium ganghwense: FH974_25235
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Entry
FH974_25235 CDS
T07175
Name
(GenBank) DUF4165 domain-containing protein
KO
K20276
large repetitive protein
Organism
pgh
Photobacterium ganghwense
Pathway
pgh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pgh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FH974_25235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_3_3
DUF4165
Big_3_2
Big_13
PKD_6
Ig_J
Motif
Other DBs
NCBI-ProteinID:
QSV17597
LinkDB
All DBs
Position
pPGC22:9896..15337
Genome browser
AA seq
1813 aa
AA seq
DB search
MRRWRNGGLAIAIALAVANSAHAELLQLDYIGADGKQHSQPPTNLIFNPQGQIQFALSAG
IDRKVRVTLVGQDGEEIESATSKLLGSSDRITIEGKSYYGSFLNLGSPVDGTYYFKAEIL
SASGTVVQSDLYPVEVDTVRPVIDSEIKWVKNGYEYGSVDLFTNGHSGKELRLEHVYDAN
GLKDATFFTVDANGVRREAPARLDPKEGTVTIDLSIAGGEAVMPHDRSEYTIGFKVTDTA
GNSQERTHVSQVDRVLPEVWLDVYDTEKQAWTPYESGMVVYSNPVKLRYKRKKADHVEFN
GSDFGWIGNYTTYDDEYTYTPKDVLFPQVRSYFHFHTKAGHYSTHRYPALQFTYADSFEK
ASTPTAIHYKLAGTDNWVEHSTPRYNKPYVIEKVRMFAEARPFRQRAWISVNDGECYIEV
GQTSCEADVTIERSSGRGYSPYPFYVGRENKSDGVHGGYLYVYHDFTPPNIESVIIDSEK
SVLTGRVVDNDTMNNWQASMWHTSKFSASAFDQTTQKTVNLEQRDLISSDYRTKYVSYDL
SGLEDGNYRFTFSATDSYGNQSVETYPEMVTIDKTMPELMVHAPSTISSLDDITITLSDG
VDPAPQLTAIRLAGGPSLDDVQLSWRSTGTNTYMLEYPVLFPSLKTGQEYQLTALASDAQ
GNIAEQKVTFDYSPPRVELSYGVDGKVLIPAVAQAVRRNDGTKVITSEPYQIGSTTIGGT
YPITATLSSDTEIPLTINGVTLYPGDTHTVDPAYNFGRNAGRLSLDVAPVEGEQMLGQAN
ILFTTTAPNAPVLVANVQTWKPAIEVATNSDQIRQGIDPVTLTARALPASQCRVTGDPAV
AMKSDVLLRPVCLVKWVNLPHGMAADASKAEAHGKLVRADAHDLMHEVYLLSGNGDEILL
DSQLHTLQAQPADNSVVMAPASPEQLEKVNMVIQDILFTNKVTSDGARCRITFDQTEAVS
AAPNSHTDNRICLFEWTAIPDGLTQVDDVPRPELEGRITEAGVYPVSWQLTLFADAQTPV
MVAKQTFDLTVVEPPLPNIGVKGVFPPVNEEEGIYLMEMAGGKFADVLIDIVGSAFDLSV
QVGNEPAVVESFPPSTGTRAVSRRIDLPEGKLWQAVPVTVTVNYSEIPSLKNTRVLHAYY
QSPGNIKPVIMTETDTAVDNAPLTLQVGIRDNYRQQDPYNPDTMGVWDVKLVREMNYNQT
EDVTDWTPAPSGDVSFDVDTSRFGDSASVRLVAMAKLRSPLEDEGFERIERGHRTAFFSV
LKGTAVNGEVQVVRESGVAPFTGIFKIKLENYSDNRAAGTVVWEVSSDGGNRWETYEPAD
RYKMQYRRVFERGSYLVRAKIVNANSGIEQYTNTVNVVAYNGYELDVEGPRSLFATATGK
FTAVAKLDGVAVEPSEVKIEWSHDGGKTYTYSGPTHSITSNELGRLKLWARVRDINAPDD
DRGAWQEWRSSVEFNKFKSPRVRLSGERVVEVGKTYTFTAQTSLPYNYMSETLVGRFTLP
DGRTVVGESVEYTVREEDLQDRYLQIGYEAEIVGYEAQTATTVTHRARAWQYVWPNFSLS
LRSSAAVYPATVTASIRPIGFSGKLEDPSYRWQLPEGVKIIDQRRPETVVFEVSEAVDGE
ISVQVGDSRLHETVKTEPLVIGEPEPYQVALSLHADNPYMRAPLGIRLRSQIDGGHPRDR
IAQYVFAVNGEEEVGNSGWKSLTLPAGTHDISLTVHSQMGKAVTETVRVEVVPNQPPECR
LESRESFGSVISTAVCDDPDGRVRNYAWEVDGIPSVVKSSRLSVSLRNHGGVVPPICVVA
TDDGGAASATTCL
NT seq
5442 nt
NT seq
+upstream
nt +downstream
nt
atgagaagatggcgtaacgggggattggcgatagcaatagcgcttgctgttgccaattcc
gcccatgcagagctattacagttggattacatcggtgctgatggtaaacaacattcacaa
ccaccaacaaatttaatcttcaatccgcaaggacagatacaatttgccctcagtgcaggc
atagaccgcaaagtacgagtgacacttgtaggccaagacggtgaagaaattgaatcagcg
accagtaagcttctgggctcgtcagatcgcatcaccatagaaggtaaaagctactatggt
tcatttttgaatctcggtagccctgttgatggcacttactactttaaagctgagatatta
tccgcctcaggtacagtggtacagtcagatttatatcctgtcgaagtagatacggtgcgg
cccgttattgatagcgaaatcaaatgggtcaaaaacggttacgagtacggttcggtcgat
ttgtttacaaacggccactcaggtaaagaactacgtcttgaacatgtttatgacgcgaat
ggactgaaagacgctaccttctttacggtagatgctaatggcgtacgtagggaagcccca
gcgcggctcgatcccaaagagggaacggtcacgattgatttaagtattgctggcggtgag
gctgtaatgcctcatgaccgaagtgaatacacgatcggattcaaggtgactgacacggct
gggaacagtcaggaacgaacgcatgtatcgcaggttgatagggtacttccggaagtatgg
ctggatgtatatgacactgagaaacaggcctggactccgtacgaaagtggcatggttgtt
tattccaaccctgtaaaactaaggtacaaaagaaaaaaagctgatcacgtcgaatttaat
ggaagcgattttgggtggatcggtaactacacaacctacgatgatgaatatacttacacc
cccaaggatgtgttgttccctcaagtgcgctcctattttcactttcacaccaaagctggg
cattattcaacacaccgctaccctgctctccaattcacctatgctgactcgtttgaaaaa
gcgtcaacacctaccgcgattcactacaagttagcaggtactgataactgggtagaacat
tcgacaccaagatacaacaagccttacgttattgaaaaagtccggatgtttgcggaagcg
cgaccatttcgacaacgtgcatggattagtgttaacgacggtgaatgctatatcgaagtt
ggccaaacgtcgtgtgaagcagacgtaactatcgaacgttcaagcgggcggggttattca
ccatatcctttttacgtgggacgtgaaaacaaatctgacggcgtgcatggtggatatttg
tatgtatatcatgattttacaccaccaaacattgaatcggtaattatcgattctgaaaaa
tcagtccttacagggcgtgtggtagataacgatactatgaataactggcaagcttcgatg
tggcacacatcgaagttcagtgcgtcggcatttgaccaaactacgcaaaagactgtgaat
ctggaacagcgtgatttgataagttcagattaccggacaaagtacgttagttatgatctg
tctggcttggaagatgggaattatcggttcaccttctctgccactgactcttatggcaat
caatctgtagaaacctaccccgagatggtgacgatagataagacaatgcctgagttaatg
gtgcatgccccgagtacgatcagttcactcgatgatatcaccatcaccctgagtgacggg
gttgacccagccccacaacttacggcgatccgtcttgctggtggcccctcactggatgat
gtccagttgtcctggcgtagtaccggtaccaacacttacatgctggagtatccggtactt
ttccccagcctcaaaacgggccaggaatatcagctgacggcactggccagtgatgcccag
gggaacatcgccgagcagaaggtgacgttcgattattccccgccacgggttgagctgagt
tacggggtcgatggcaaagtcctgatccctgctgtagcgcaggcggtccggcggaatgac
ggcaccaaggtgatcacgtcggagccataccaaatcgggtcaaccaccatcggtggtacc
tacccgatcaccgcgaccctctccagcgacacggaaatcccgctgaccatcaacggtgtc
actctctatccgggcgatacccacacggttgacccggcctacaacttcggccgcaatgct
ggacggctgtcattggatgtcgccccggttgagggcgaacagatgctgggacaagccaat
atattgttcaccaccacggccccgaacgcgccggtactggtggctaacgtccagacttgg
aaaccggccattgaggtggccaccaacagcgaccagatccggcagggaatagatccggtg
accctcacagctcgcgccctgccagccagccagtgtcgggtgaccggtgatccggcggtg
gccatgaagagtgatgtcctgctcaggcctgtgtgtctggtgaagtgggtgaacctgccg
cacggcatggcagccgacgccagcaaggccgaagcccacggcaagctggtacgtgccgac
gcccatgacctgatgcacgaggtgtacctgctgtcgggcaacggcgatgaaatcctgctg
gacagccagctgcacactctgcaggcgcagcctgccgacaacagcgtagtgatggctccg
gccagccccgagcagctggagaaagtgaacatggtgattcaggatattctgtttaccaac
aaggtcaccagcgacggggcacgctgccggatcaccttcgatcaaactgaagcggtcagt
gcggccccgaacagccacaccgacaaccgcatctgcctgtttgaatggaccgcgatcccc
gatgggctgacccaggttgatgacgtgccgaggcctgagctggaaggccggattaccgag
gccggcgtgtatccggtgtcgtggcagctgaccctgtttgccgacgcgcagaccccggtg
atggttgccaagcagacgtttgacctgacggtggtcgagccgccactacccaacatcggc
gttaaaggggtttttccgccggtaaacgaggaagaagggatatacctgatggagatggcc
ggcggcaagtttgctgatgtgctgatcgacattgtgggcagtgcttttgacctgtccgtg
caggttggcaacgagccggcagtggtcgagtcgttcccgccgtcaacgggtacccgggcc
gtgtcccgccggatagacctgccggaaggcaagctgtggcaggcagtgccggtgacggtg
acggtgaactacagtgagatcccgtcgttgaagaatacccgtgtccttcacgcctattac
cagtcgccgggcaacattaagccggtgatcatgacggagaccgacacggcggtggacaac
gcgccgctgacactgcaggtgggtatccgtgacaactaccgccagcaagacccgtacaat
cccgacaccatgggggtatgggacgtcaaactggtgcgtgaaatgaactacaaccagacc
gaggatgtcacggactggacaccagcgccgagcggtgatgtcagttttgatgttgatacc
tcccgtttcggggactccgccagtgtccgcctggtggcgatggccaagctacgttcacct
ctggaagatgaagggttcgagcgtatcgagcgaggtcaccgtactgcgtttttcagtgtg
ctcaaaggcaccgcggtaaacggcgaggtacaggtagtgcgtgagtccggggtggccccg
tttaccggaattttcaagatcaagctggaaaactacagcgataaccgcgccgccggtacg
gtggtctgggaggtgtcgtcagacggcggcaaccgctgggagacatacgagccggccgac
cgctataagatgcagtaccggcgggtcttcgagcggggcagttatctggtcagggcgaaa
atcgtcaacgccaacagcggcatcgagcagtacacgaacaccgtcaacgtggtggcgtat
aacgggtacgagctggatgttgaggggccgcgttcgttgtttgccaccgccacgggcaag
ttcacggcagtcgccaagctggacggggtggcagtggagccgtccgaagtgaagatcgaa
tggtcgcacgacggcgggaagacctacacatacagcggcccgacccatagcatcacgagc
aatgagcttgggcgcctgaaattgtgggcgcgggtgagggacatcaacgcgccggacgat
gaccggggggcctggcaggagtggcgcagctcggtggagttcaacaagttcaagtcacca
cgggtgcgcctgagcggcgagcgggtggttgaggtcggcaagacgtatacgttcacggcc
cagaccagcctgccatacaactacatgagcgaaacgctagtcgggcggttcaccctgccg
gatgggcggactgttgttggggaaagtgtggagtacacggtgcgggaagaagacctgcaa
gaccggtacctgcaaattgggtatgaggcggaaatcgtcgggtacgaggcgcaaaccgcc
accaccgtgacgcaccgagcccgagcctggcaatacgtctggcccaacttcagcctgagc
ctgcgcagcagcgccgcggtgtacccggccacggtgaccgcgagcatccggccgatcggc
ttcagcggcaaactggaagatccgagctatcgctggcagttgccggaaggggtgaagatc
atcgaccagcgtcgtccggaaacggtggtgtttgaggtgagcgaggcggtagacggagaa
atcagcgtccaagtgggggatagccgcctgcatgagacggtgaagaccgagccgctggta
atcggtgagccggagccgtatcaggttgccctgagcctgcatgctgacaacccgtacatg
cgagccccgctggggatccggctgcgtagccagattgacggtggccatccgcgggaccgc
atcgcgcagtatgtgtttgcggtgaacggggaggaagaagtgggcaacagtggctggaag
agcctgacgctgcccgccggtacgcacgacatcagcctgacggtgcatagtcagatgggc
aaggccgtgacagaaacggttcgggtcgaggtggtgccgaaccagccaccggagtgccgt
ttggaaagccgggagtcgtttggctcggtgatctccacggcggtatgtgatgatccggat
ggacgggtccgaaactacgcatgggaggtcgatgggataccatcggtggttaagtcgagc
cggctgtcggtgtcgctgcgtaaccacggcggggtagtgccgccaatctgtgtggtggcc
acggacgatggcggggccgcatcagcaaccacctgcctgtaa
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