Photobacterium ganghwense: FH974_25715
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Entry
FH974_25715 CDS
T07175
Name
(GenBank) DUF4165 domain-containing protein
KO
K20276
large repetitive protein
Organism
pgh
Photobacterium ganghwense
Pathway
pgh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pgh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
FH974_25715
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_3_3
DUF4165
Big_3_2
PKD_6
Motif
Other DBs
NCBI-ProteinID:
QSV17506
LinkDB
All DBs
Position
pPGC22:108287..113749
Genome browser
AA seq
1820 aa
AA seq
DB search
MRLHAIAITLCGCVVLPVQAELLSTEFLDTNGKQRTISPNQRYANPTGQMSFALSAGIDR
RVRVTLLDHAGQLVEQSTSDLLGSSNRISVNGKSFYGAYLSLGSPSDGEYQIKAEILSAA
GTSVQTDVYPLIIDTQKPGYNSVRNNASGYRMTTTGDVWKLGNGGSGDSVFIVDGIHSAT
PIKSVKIHSYREDGTLYTTREASFDATIFEAQVSFERFIFPDSDLDEAFTFTFEIEDEAG
NRIITAPQKVFYDNITNAPKTPFAVFNPDATTAILPGLTGFVPYKAGMEVRSNPIELIWQ
VPRTNWHRYREGGLTITNALGKNEVVYEDADYVYILNTAPYGNLNGNYWRFNNFGQWGGS
YISYNLKLSDSAPVTPRLMSVEYNFSDVGWRDFYRYEVDNSVLPVTINGVKVVVEPRPYP
QVAVHNGECTIPVGKSECFIDWQYTMKTGENGYLHDNASVFDANRTLRSPPMWAETHFND
AFYPEITTKFEESTNKLSAFIRQKGRGAYFDRLRLKESWLEDGNGRVLDVAKAKTAENGE
YYTYEFDLNTLPEGQFNLHVVAQERHGPKTRQPLFEFTSDNTPPSLTVHAPSTISSLDDI
TITLSDGVDPAPQLTAIRLAGGPSLDDVQLSWRSTGTNTYMLEYPVLFPSLKTGQEYQLT
ALASDAQGNIAEQKVTFDYSPPRVELSYGVDGKVLIPAVAQAVRRNDGTKVITSEPYQIG
STTIGGTYPITATLSSDTEIPLTINGVTLYPGDTHTVDPAYNFGRNAGRLSLDVAPVEGE
QMLGQANILFTTTAPNAPVLVANVQTWKPAIEVATNSDQIRQGIDPVTLTARALPASQCR
VTGDPAVAMKSDVLLRPVCLVKWVNLPHGMAADASKAEAHGKLVRADAHDLMHEVYLLSG
NGDEILLDSQLHTLQAQPADNSVVMAPASPEQLEKVNMVIQDILFTNKVTSDGARCRITF
DQTEAVSAAPNSHTDNRICLFEWTAIPDGLTQVDDVPRPELEGRITEAGVYPVSWQLTLF
ADAQTPVMVAKQTFDLTVVEPPLPNIGVKGVFPPVNEEEGIYLMEMAGGKFADVLIDIVG
SAFDLSVQVGNEPAVVESFPPSTGTRAVSRRIDLPEGKLWQAVPVTVTVNYSEIPSLKNT
RVLHAYYQSPGNIKPVIMTETDTAVDNAPLTLQVGIRDNYRQQDPYNPDTMGVWDVKLVR
EMNYNQTEDVTDWTPAPSGDVSFDVDTSRFGDSASVRLVAMAKLRSPLEDEGFERIERGH
RTAFFSVLKGTAVNGEVQVVRESGVAPFTGIFKIKLENYSDNRAAGTVVWEVSSDGGNRW
ETYEPADRYKMQYRRVFERGSYLVRAKIVNANSGIEQYTNTVNVVAYNGYELDVEGPRSL
FATATGKFTAVAKLDGVAVEPSEVKIEWSHDGGKTYTYSGPTHSITSNELGRLKLWARVR
DINAPDDDRGAWQEWRSSVEFNKFKSPRVRLSGERVVEVGKTYTFTAQTSLPYNYMSETL
VGRFTLPDGRTVVGESVEYTVREEDLQDRYLQIGYEAEIVGYEAQTATTVTHRARAWQYV
WPNFSLSLRSSAAVYPATVTASIRPIGFSGKLEDPSYRWQLPEGVKIIDQRRPETVVFEV
SEAVDGEISVQVGDSRLHETVKTEPLVIGEPEPYQVALSLHADNPYMRAPLGIRLRSQID
GGHPRDRIAQYVFAVNGEEEVGNSGWKSLTLPAGTHDISLTVHSQMGKAVTETVRVEVVP
NQPPECRLESRESFGSVISTAVCDDPDGRVRNYAWEVDGIPSVVKSSRLSVSLRNHGGVV
PPICVVATDDGGAASATTCL
NT seq
5463 nt
NT seq
+upstream
nt +downstream
nt
atgagactacacgcgatagcgattacgttatgtggttgtgtggtacttcccgtacaagct
gaactcttgtcgacagagtttcttgataccaatgggaaacaacgtaccatcagccctaat
caacgttatgccaaccctacaggacaaatgagttttgctttgagcgctgggatagaccga
agagtacgagtgacattactggatcatgccggtcaactcgttgaacaatctaccagtgac
ttgctcggctcatcaaaccgtatttcggtgaacggcaaatcattttacggcgcttatcta
agcctgggctcacctagcgatggtgagtatcaaattaaagccgaaatcctttcagccgca
ggcacatcggtacaaaccgatgtgtacccattaattatcgatacccaaaaacctggctac
aacagcgtcagaaacaacgcatcaggataccggatgaccacaacgggtgatgtctggaaa
ctggggaacggtggcagtggcgattccgttttcattgttgacggcatacactcagccaca
ccaatcaagtcggttaaaattcacagctatcgtgaagacggcaccttgtatacgacccgt
gaagccagttttgacgcaacaatattcgaggcgcaggtatcattcgaacgcttcatcttt
cccgattcagatctggatgaggcattcaccttcacatttgaaattgaagatgaagccgga
aaccggattatcacggccccacaaaaggttttttacgacaatataacgaatgcacccaaa
acgccatttgcggtattcaaccctgatgcaacaacggcgattttgccgggtctgaccgga
ttcgtaccatacaaagctggaatggaagtcaggagcaacccaatagagctaatttggcag
gtgccccgtaccaactggcaccgctaccgggagggtggtttaacgatcaccaatgcctta
ggcaaaaatgaagtcgtgtatgaagatgctgactacgtttacatcttaaacacagcgcca
tatggcaatctgaatggcaactattggcggtttaataactttggccagtggggtggctca
tatatcagttacaacctaaaactgtctgatagcgcaccagtcacgccaagactaatgtcg
gtcgaatacaatttcagcgatgtgggatggcgggacttctaccgttatgaagtcgataac
agtgtgcttcctgtgacaatcaatggggtcaaagttgtggttgaacctcggccatatcca
caagtcgcggtacacaacggtgaatgtacaattcctgttggaaaatctgaatgtttcatc
gactggcagtacacaatgaaaactggagaaaatggctatttacatgacaacgcctcagtt
ttcgatgcgaatagaacgctcaggtccccgccaatgtgggcagaaacccactttaacgat
gctttctatccggaaataacaacaaagtttgaggaatcgaccaacaagctaagcgctttc
attcgtcaaaaagggaggggggcatacttcgaccgtttgcggttaaaagaatcttggctt
gaagatggcaacggtagagtactcgatgtggcgaaggctaaaacagctgaaaatggtgag
tactacacctatgaattcgacttgaacactttgcctgaagggcaattcaacctacacgtt
gttgcacaggaacggcatggtccaaaaacacgtcagccgttgtttgaatttaccagtgat
aacaccccgccgtcactaacagtgcatgccccgagtacgatcagttcactcgatgatatc
accatcaccctgagtgacggggttgacccagccccacaacttacggcgatccgtcttgct
ggtggcccctcactggatgatgtccagttgtcctggcgtagtaccggtaccaacacttac
atgctggagtatccggtacttttccccagcctcaaaacgggccaggaatatcagctgacg
gcactggccagtgatgcccaggggaacatcgccgagcagaaggtgacgttcgattattcc
ccgccacgggttgagctgagttacggggtcgatggcaaagtcctgatccctgctgtagcg
caggcggtccggcggaatgacggcaccaaggtgatcacgtcggagccataccaaatcggg
tcaaccaccatcggtggtacctacccgatcaccgcgaccctctccagcgacacggaaatc
ccgctgaccatcaacggtgtcactctctatccgggcgatacccacacggttgacccggcc
tacaacttcggccgcaatgctggacggctgtcattggatgtcgccccggttgagggcgaa
cagatgctgggacaagccaatatattgttcaccaccacggccccgaacgcgccggtactg
gtggctaacgtccagacttggaaaccggccattgaggtggccaccaacagcgaccagatc
cggcagggaatagatccggtgaccctcacagctcgcgccctgccagccagccagtgtcgg
gtgaccggtgatccggcggtggccatgaagagtgatgtcctgctcaggcctgtgtgtctg
gtgaagtgggtgaacctgccgcacggcatggcagccgacgccagcaaggccgaagcccac
ggcaagctggtacgtgccgacgcccatgacctgatgcacgaggtgtacctgctgtcgggc
aacggcgatgaaatcctgctggacagccagctgcacactctgcaggcgcagcctgccgac
aacagcgtagtgatggctccggccagccccgagcagctggagaaagtgaacatggtgatt
caggatattctgtttaccaacaaggtcaccagcgacggggcacgctgccggatcaccttc
gatcaaactgaagcggtcagtgcggccccgaacagccacaccgacaaccgcatctgcctg
tttgaatggaccgcgatccccgatgggctgacccaggttgatgacgtgccgaggcctgag
ctggaaggccggattaccgaggccggcgtgtatccggtgtcgtggcagctgaccctgttt
gccgacgcgcagaccccggtgatggttgccaagcagacgtttgacctgacggtggtcgag
ccgccactacccaacatcggcgttaaaggggtttttccgccggtaaacgaggaagaaggg
atatacctgatggagatggccggcggcaagtttgctgatgtgctgatcgacattgtgggc
agtgcttttgacctgtccgtgcaggttggcaacgagccggcagtggtcgagtcgttcccg
ccgtcaacgggtacccgggccgtgtcccgccggatagacctgccggaaggcaagctgtgg
caggcagtgccggtgacggtgacggtgaactacagtgagatcccgtcgttgaagaatacc
cgtgtccttcacgcctattaccagtcgccgggcaacattaagccggtgatcatgacggag
accgacacggcggtggacaacgcgccgctgacactgcaggtgggtatccgtgacaactac
cgccagcaagacccgtacaatcccgacaccatgggggtatgggacgtcaaactggtgcgt
gaaatgaactacaaccagaccgaggatgtcacggactggacaccagcgccgagcggtgat
gtcagttttgatgttgatacctcccgtttcggggactccgccagtgtccgcctggtggcg
atggccaagctacgttcacctctggaagatgaagggttcgagcgtatcgagcgaggtcac
cgtactgcgtttttcagtgtgctcaaaggcaccgcggtaaacggcgaggtacaggtagtg
cgtgagtccggggtggccccgtttaccggaattttcaagatcaagctggaaaactacagc
gataaccgcgccgccggtacggtggtctgggaggtgtcgtcagacggcggcaaccgctgg
gagacatacgagccggccgaccgctataagatgcagtaccggcgggtcttcgagcggggc
agttatctggtcagggcgaaaatcgtcaacgccaacagcggcatcgagcagtacacgaac
accgtcaacgtggtggcgtataacgggtacgagctggatgttgaggggccgcgttcgttg
tttgccaccgccacgggcaagttcacggcagtcgccaagctggacggggtggcagtggag
ccgtccgaagtgaagatcgaatggtcgcacgacggcgggaagacctacacatacagcggc
ccgacccatagcatcacgagcaatgagcttgggcgcctgaaattgtgggcgcgggtgagg
gacatcaacgcgccggacgatgaccggggggcctggcaggagtggcgcagctcggtggag
ttcaacaagttcaagtcaccacgggtgcgcctgagcggcgagcgggtggttgaggtcggc
aagacgtatacgttcacggcccagaccagcctgccatacaactacatgagcgaaacgcta
gtcgggcggttcaccctgccggatgggcggactgttgttggggaaagtgtggagtacacg
gtgcgggaagaagacctgcaagaccggtacctgcaaattgggtatgaggcggaaatcgtc
gggtacgaggcgcaaaccgccaccaccgtgacgcaccgagcccgagcctggcaatacgtc
tggcccaacttcagcctgagcctgcgcagcagcgccgcggtgtacccggccacggtgacc
gcgagcatccggccgatcggcttcagcggcaaactggaagatccgagctatcgctggcag
ttgccggaaggggtgaagatcatcgaccagcgtcgtccggaaacggtggtgtttgaggtg
agcgaggcggtagacggagaaatcagcgtccaagtgggggatagccgcctgcatgagacg
gtgaagaccgagccgctggtaatcggtgagccggagccgtatcaggttgccctgagcctg
catgctgacaacccgtacatgcgagccccgctggggatccggctgcgtagccagattgac
ggtggccatccgcgggaccgcatcgcgcagtatgtgtttgcggtgaacggggaggaagaa
gtgggcaacagtggctggaagagcctgacgctgcccgccggtacgcacgacatcagcctg
acggtgcatagtcagatgggcaaggccgtgacagaaacggttcgggtcgaggtggtgccg
aaccagccaccggagtgccgtttggaaagccgggagtcgtttggctcggtgatctccacg
gcggtatgtgatgatccggatggacgggtccgaaactacgcatgggaggtcgatgggata
ccatcggtggttaagtcgagccggctgtcggtgtcgctgcgtaaccacggcggggtagtg
ccgccaatctgtgtggtggccacggacgacggcggggccgcatcagcaaccacctgcctg
taa
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