Porphyromonas gingivalis W83: PG_0035
Help
Entry
PG_0035 CDS
T00145
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pgi
Porphyromonas gingivalis W83
Pathway
pgi03030
DNA replication
pgi03430
Mismatch repair
pgi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PG_0035 (dnaE)
03430 Mismatch repair
PG_0035 (dnaE)
03440 Homologous recombination
PG_0035 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgi03032
]
PG_0035 (dnaE)
03400 DNA repair and recombination proteins [BR:
pgi03400
]
PG_0035 (dnaE)
Enzymes [BR:
pgi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PG_0035 (dnaE)
DNA replication proteins [BR:
pgi03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PG_0035 (dnaE)
DNA repair and recombination proteins [BR:
pgi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PG_0035 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
T2SSK
HHH_3
Motif
Other DBs
NCBI-ProteinID:
AAQ65289
UniProt:
Q7MXW4
LinkDB
All DBs
Position
complement(42688..46374)
Genome browser
AA seq
1228 aa
AA seq
DB search
MEPFVHLHVHSQFSLLDGQAAINDLVDKAIADGMPGIALTDHGAMFGIKEFYNYVEKKNS
GHNATLKDCRRELDQLNDSKSADMLTDEERNRIVKLQQKIEETKKLLFKPILGCEAYCAR
RTRFDKDNQIPDPYHPRRSIDASGWHLILLAKNLRGYKNLIKMVSYSWTEGQYYRPRIDK
ELLQKYHEGIIVSSACLGGEIPQHIMAGEIAKAEEAILWFKELFGDDYYLEIQRHETHNP
LGNQDVFPQQQRVNRVILELGKKLGVKVIATNDVHFCNEEDAEAHDRLICLSTGKDLDDP
NRMRYTKQEWMKTTAEMSAIFEDLPETLSNTLEILDKVELYSIDNKALMPDFPIPPEYKD
DDDYLRFLTYEGARRKYGEDLSDEIKERIDFELETIKGMGFPGYFLIVQDFIAAARSMGV
SVGPGRGSAAGSAVAYCLGITDIDPIKYHLLFERFLNPDRISMPDIDVDFDDDGRAEILR
WVTEKYGKERVAHIITYGTMATKSSIKDVARVQRLPLLESNRLAKLVPDKIPGEKKVNLK
KAIEFVPELKQASLSSDKVMRDTLKYAQMLEGNVRNTGVHACGIIIGKTDISDVVPVSTA
PDKDTKEELLVTQYEGSVIEQTGLIKMDFLGLKTLSIIKEALVNIKRRHGIDLNIDTIPL
DDPLTYKLYSDGRTIGTFQFESGGMQKYLRELQPSAFEDLIAMNALYRPGPMDYIPSFIA
RKHGREPIDYDLPEMEEYLKETYGVTVYQEQVMLLSRKLAGFTRGQSDELRKAMGKKLIE
KMNVLKVKFLEGGNKNGHPEEVLEKIWTDWEKFASYAFNKSHATCYSWVAYQTAYLKANY
PAEYMAGALSRNLNNITEITKLMDECKSMKIGVLVPDVNESEMKFSVNANGDIRFGLSAV
KGVGSGAVEQIIAEREANGLYKDIFDFVERINLSACNRKTMESLALAGAFDSFALSREEY
MAPPLTGREESYIQALMRYGSVVQEEKHSQSNSLFGEEEDLMIPRPQPSPTEPWNDLERL
NKERELVGLYLSSNPMAQYQVILDHYCNTHAADLTDPDSLVGKNLVLAGIVTKAFQGISR
SNNPYSKITLEDLSGTGEIPLFGQAHVNFGNYCKEGLYLLIRASVQPHKWKEGEMELVVT
SIELLPQVADTLIKKMTILLPASKIDNELIEMLSDELTNNSGKTMLFIKVYDHTETFDVE
LAQQKSLIKVSPELVNRLKTYEINFALE
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atggaacccttcgtacacctgcacgtacactcccaattctctctgcttgacggacaggcc
gctatcaatgacttggtggacaaagccattgccgacggtatgccgggtattgctctgacc
gatcatggagccatgttcggcatcaaggagttttacaactatgtggagaagaagaacagc
gggcacaatgcgacattgaaggactgtaggcgcgaactggatcaactgaacgactcgaag
agtgccgacatgctgaccgatgaagagcgcaaccgcattgtcaagttgcagcagaagata
gaggagaccaaaaaactcctcttcaaacctatccttgggtgtgaggcatattgtgctcga
cgtacgcgattcgacaaggataaccagataccggatccgtatcatcccagacgctccatc
gatgccagcggttggcacttgatcctgctggcaaaaaacttgcgagggtacaagaatctg
atcaaaatggtcagctattcatggacagaaggacagtactaccgtccgcgtatcgacaag
gagcttttgcagaagtatcatgaaggtatcattgtctcttcggcctgcctgggaggagag
ataccacagcatatcatggcaggagagattgccaaggctgaggaggccatcctctggttc
aaagagctttttggggacgattactatttggagattcagcgacacgagacgcataatcca
ctcggcaatcaggatgttttcccccagcaacagcgcgtaaatcgcgtcatactggagctt
ggcaagaagttgggcgtcaaagttattgcgacgaacgatgtccatttctgcaatgaagaa
gatgctgaggcgcacgaccgtctgatctgtctgagcacagggaaggatctggacgatccg
aacaggatgcgctataccaagcaggaatggatgaagactacggcagagatgagcgccata
ttcgaggatctacctgagactctttccaacacattagaaatacttgacaaggtagagtta
tacagcatcgacaacaaagccctgatgccggactttcctatcccccccgaatataaagac
gatgatgactacctgcgtttccttacctacgaaggggccaggcgcaagtatggagaggat
ctttccgatgagataaaagagcgtatcgactttgaactggaaaccatcaaaggaatgggg
ttccccggctacttccttattgtacaggatttcattgcagccgcacgaagtatgggcgtc
tctgtcggacccggccgaggatcggcagccggttcggcggtagcttactgtttggggatc
acggatatcgatccgatcaagtaccatttgcttttcgagcgttttctcaatccggatcgt
atctccatgcccgatatagacgtcgacttcgatgatgacgggcgtgccgaaatactccgc
tgggtgacggaaaaatacggcaaggagagagtggcccacatcatcacctacggtacgatg
gccacaaagagttctattaaggatgtggctcgcgtacagaggctgcccttactcgaaagc
aatcgtttagccaagctcgtaccagacaaaattcccggagagaagaaagtcaatctgaag
aaagcaatcgaatttgttccagagctgaagcaagcatcgctaagctccgataaggtaatg
cgcgataccctgaaatacgcccaaatgctggaggggaatgtgcgcaatacaggtgtgcat
gcctgcggtatcatcattgggaaaacggatatcagcgatgtcgttccggtcagtacggct
cccgacaaagacacgaaggaggagctgctggtcacacaatacgaaggctctgtcatcgaa
cagacgggactgatcaaaatggacttcctcgggctgaaaacgctctcgatcatcaaagaa
gctttggtcaacataaagcggcgccatggcattgacttgaatatagacacgatccctctc
gacgatcctcttacatataagctatacagcgatggacgtaccataggtactttccaattc
gaatccggtgggatgcaaaagtatcttagggagctacagccctctgctttcgaggacttg
atagcgatgaatgctctctatcgtcccggtccgatggactatatcccttcttttatcgca
cgcaagcatgggcgtgagcctatcgattacgacctgcctgagatggaagaatatctcaaa
gaaacttatggtgtgacggtgtatcaggagcaagtcatgcttctgagtcgcaagcttgcc
ggttttacccgaggccagagcgatgagcttcgtaaggctatgggcaaaaaactcatcgaa
aagatgaatgttctgaaggtgaagtttctcgagggggggaataagaatggacatccggaa
gaagttctggaaaagatctggacagactgggagaagttcgccagctatgctttcaacaag
agtcatgccacctgctacagttgggtagcctaccaaacggcttacctgaaagcaaactat
cctgctgaatatatggcaggagcattgagccgaaacctgaataacatcacggaaataacc
aagctcatggatgagtgcaagtccatgaagatcggcgtattggtaccggatgtgaacgag
tccgaaatgaaattctcagtaaatgccaatggggatattcggttcggtctcagcgctgta
aagggtgtaggatcgggagccgtggagcagatcattgccgaacgcgaagccaacgggcta
tataaggacatcttcgactttgtggagcggatcaatctctctgcctgcaatcgcaagacg
atggagagtctggccttggccggtgctttcgacagcttcgctctatcccgggaggaatat
atggctcctcctctgacaggaagagaggagtcatacatacaagcacttatgcgctatggg
tccgtagtacaagaggagaagcacagccagagcaattccctcttcggagaggaagaagat
ctgatgattcctcgtccgcagccatctcccaccgagccatggaacgacttggaaaggctc
aataaagaacgtgaactcgtagggctctaccttagttccaatccaatggctcagtaccaa
gtcattctcgatcactattgcaatacccatgcagccgatttgaccgatccggattccttg
gtcgggaaaaatttggttttggccggtattgttaccaaggcttttcagggaatctctcgc
tcgaataatccgtactcaaagattacgttagaggatctgtccggcacgggcgaaatacct
cttttcggacaggctcatgtaaacttcggcaattattgcaaggaggggctgtatctcctc
attcgcgcatccgttcagcctcataagtggaaagagggtgaaatggaattggtcgtgacc
tcaatcgaactgctacctcaagtggccgatacattgatcaaaaagatgacgatcctactg
ccggcatcgaagatcgacaatgagctgatcgaaatgctgtctgacgaattgacaaacaat
tcggggaaaacgatgttatttatcaaagtgtatgaccatacggagactttcgatgtcgaa
ctggcacagcagaaatcgctgatcaaagtgtcccccgaactggtgaatagattgaagact
tatgagattaactttgcacttgaatag
DBGET
integrated database retrieval system
