Porphyromonas gingivalis W83: PG_0054
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Entry
PG_0054 CDS
T00145
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pgi
Porphyromonas gingivalis W83
Pathway
pgi03410
Base excision repair
pgi03430
Mismatch repair
pgi03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pgi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PG_0054 (recJ)
03430 Mismatch repair
PG_0054 (recJ)
03440 Homologous recombination
PG_0054 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pgi03400
]
PG_0054 (recJ)
DNA repair and recombination proteins [BR:
pgi03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
PG_0054 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PG_0054 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PG_0054 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Toprim
DUF3881
Motif
Other DBs
NCBI-ProteinID:
AAQ65304
UniProt:
Q7MXV3
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All DBs
Position
65205..66959
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AA seq
584 aa
AA seq
DB search
MNYNWNLEPFTAEERSLGTIFCRELRLAPVVGCLLARRGIASVEEAKRFFRPRLEDLHDP
FLMKDMDKAVARLNRAVGRKEKIMIYGDYDVDGTTAVALVYKYLRATGCSETQLDYYIPD
RYDEGYGISYRGIDLAHSLGTKLIIVLDCGIKAVEKVAYAKSLDIDFIICDHHNPDETLP
DAVAVLDAKRADNTYPYEHLSGCGVGFKFMQAYARSNNLPESKLLPLLDLVAVSIASDIV
PIMGENRILAYYGLRQLNKRPCLGLQAIIDVCGLKKRRIDMNDIVFKIGPRINASGRMMN
GGKAVELLLSQDAVEAQSRTANIDEYNDQRRELDKDVTEQAIDILGELSDVDKKILVIYR
PEWHKGVIGIVASRMTERYSRPTIVMTKSGDFISGSARSVGGFDVYKAIEHCKDLLVNFG
GHPFASGLTIKEENLETFRKMITDYAEEAVSPELLVPQIDVDAEISIEEVNYKLLDNLKR
MGPFGPENSKPVFISRQLYDAGGSRAVGKASEHLKIDVRVGSGERHPVSGIAFNQAGHCD
EIKNGSFRLCYTIEENEFNGNKSLQLLVRDIKPEEESAINGKTR
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaattacaactggaatttggagccgtttaccgcagaggaacgttccctcgggacaata
ttctgtcgggagctaaggctcgcgcccgtagtggggtgcctattggcacgcaggggaata
gcttccgtagaggaagctaagcgtttctttcgcccaagattggaggatctccacgatcct
ttcctgatgaaggatatggacaaggctgtagctcgcctgaacagggcagtagggcgaaag
gaaaaaatcatgatttacggtgactatgatgtagacggtaccacggcagtggcactcgtc
tataagtatttgcgcgccacgggctgctccgaaacccaattggattactacattccggat
cggtacgatgagggttatggtatctcttatcgaggaattgatttggctcactctctcgga
acgaaactgataatcgtactcgactgtggtatcaaagccgtcgaaaaggtggcatacgcc
aagtcgcttgacattgattttattatctgcgaccatcacaatccggatgaaacgctacct
gatgccgttgcggtgctggatgccaaaagagctgacaatacgtatccttacgaacatctc
tccggctgtggagtcgggttcaagtttatgcaagcctatgctcggagcaacaatttgccc
gaatccaagctccttcctttgctcgacctcgtggctgtcagtatagcttcggatattgtc
cctatcatgggagagaaccgcatactcgcctattacggactgcgccaacttaataaacgc
ccttgtctcggcttgcaggctataatagatgtatgcggtctgaagaagcgaaggatagat
atgaacgacatcgtcttcaagatcgggcctcggatcaatgcttcaggtcgtatgatgaat
gggggtaaggctgtggaactactactctctcaggatgctgtggaagctcaaagccgaacg
gccaatatagacgaatacaacgaccaacgccgtgagctcgacaaggatgtgacggaacag
gccatcgatattttgggcgagctatccgatgtggacaagaagatcctcgttatctaccgg
ccggaatggcacaagggcgttatcggcatagtggccagcaggatgaccgaacgctattcg
cgcccgacgatcgtgatgactaagagcggtgatttcatttcaggctcggctcgatccgta
ggagggttcgatgtgtacaaagccatcgaacattgcaaggacttgctggtcaatttcgga
gggcatccttttgcctccggtctgacgatcaaagaagagaatctggaaaccttccgaaag
atgattacggactatgccgaagaggctgtatcgccggaactattggtgccacaaatagat
gtagatgccgaaatatccatcgaagaggtcaattacaaacttctcgacaacctcaagcgg
atggggccattcggcccggaaaactccaagccggtctttatatcccgacaactgtatgat
gccggtggtagcagggctgtaggaaaagcttccgaacacctgaagatagatgtgagagtg
ggatcgggcgaacgccatccggtgagtgggattgcgtttaatcaggccggtcattgcgat
gagatcaaaaacggctcatttcgtctttgctacacgatagaagagaacgaattcaacggc
aacaaatcattgcaactattggtgcgcgatattaagcccgaagaagaatctgctattaac
ggaaaaacaagatga
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