Porphyromonas gingivalis W83: PG_0121
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Entry
PG_0121 CDS
T00145
Symbol
hup-1
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
pgi
Porphyromonas gingivalis W83
Brite
KEGG Orthology (KO) [BR:
pgi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pgi03032
]
PG_0121 (hup-1)
03036 Chromosome and associated proteins [BR:
pgi03036
]
PG_0121 (hup-1)
03400 DNA repair and recombination proteins [BR:
pgi03400
]
PG_0121 (hup-1)
DNA replication proteins [BR:
pgi03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
PG_0121 (hup-1)
Chromosome and associated proteins [BR:
pgi03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
PG_0121 (hup-1)
DNA repair and recombination proteins [BR:
pgi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
PG_0121 (hup-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
DUF2267
HU-CCDC81_euk_2
HU-DNA_bdg
UPF0181
TFIIB
Motif
Other DBs
NCBI-ProteinID:
AAQ65364
UniProt:
Q7MXP9
LinkDB
All DBs
Position
144608..144874
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AA seq
88 aa
AA seq
DB search
MNKTDFIAAVAEKANLTKADAQRAVNAFAEVVTEQMNAGEKIALIGFGTFSVSERAARKG
INPKTKKSISIPARKVVRFKPGSTLELK
NT seq
267 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagacagattttattgcagctgtagctgaaaaggccaacctcacaaaggctgat
gcccagagagcagtaaatgcatttgcagaagttgtaacagaacagatgaatgccggagag
aaaatcgctctcatcggattcggtactttctcagtgagcgagcgtgctgctcgcaaaggc
attaatcctaagacgaaaaaatctatttctatccctgcccgtaaggttgttcgtttcaaa
ccgggctctactttggaacttaagtaa
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