Porphyromonas gingivalis W83: PG_0332
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Entry
PG_0332 CDS
T00145
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
pgi
Porphyromonas gingivalis W83
Pathway
pgi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pgi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PG_0332 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pgi03021
]
PG_0332 (rho)
03019 Messenger RNA biogenesis [BR:
pgi03019
]
PG_0332 (rho)
Transcription machinery [BR:
pgi03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
PG_0332 (rho)
Messenger RNA biogenesis [BR:
pgi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PG_0332 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AT_hook
AAA_25
AAA
Spore_III_AA
AAA_22
Mor
Mitofilin
Motif
Other DBs
NCBI-ProteinID:
AAQ65545
UniProt:
Q7MX79
LinkDB
All DBs
Position
365759..367735
Genome browser
AA seq
658 aa
AA seq
DB search
MQKYTIVDLNEKAEAELAAIAGELGIANAGSMPKQELIYKILDEQAISVAGVRKEKQKTT
EDRHTERRKPGRPRKNAEEEAPESEDVAAAPAEPNDEEAQAKRKRGRPRKAAEEIAEETR
EDVQQLVALAAAEETNATEKESAGRKPAAKTSTASPAKAPAKALPRPAETTPRVAPSPPP
TTPVSEPAKDDAKPETPAPPPAIESITTTPAAGAVDEGGARRLVFRHKNSSSVLDQVLPY
SSPQPPQRPKPAGAPVGSSPIRQRQAAGVPTPRREPQQPLYNFDGILECMGVLEIMPDDY
GFLRSSDYNYLSSPDDVYVSQQQIKHNGLKTGDVVAGTIRPPREGEKYFPFVQLRSVNGR
SPEEIRDRVPFDHLTPLFPEEKFTLEAPGIRAVNDKISVRVVDLFAPIGKGQRGLIVSQP
KTGKTMLLKDIANAIAANHPEVYMIVLLIDERPEEVTDMARSVNAEVIASTFDEPAERHV
KIAEIVLNKAKRMVECGHDVVILLDSITRLARAYNTVQPASGKVLSGGVDANALQKPKRF
FGAARNIENGGSLTILATALTDTGSKMDEVIFEEFKGTGNMELQLDRRLSNKRIFPAVDI
MSSSTRRDDLLQDETTLNRMWILRKYLSDMNPVEAMEFVRKQLENTHTNMEFLASMNN
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagtacacgatcgtcgatttgaacgaaaaggctgaagctgaactcgctgctata
gccggcgagctgggtattgccaatgccggctcaatgcccaaacaagaacttatttacaaa
atactcgacgagcaggctatcagtgtagccggcgtccggaaggaaaaacaaaaaacgacg
gaagaccggcacaccgaaaggcgcaagccgggtcgtccgcgcaaaaacgccgaggaggaa
gctcccgaaagcgaagacgtcgcagccgctcctgccgagccgaacgacgaggaagctcag
gccaaacgcaagcgtggccgccctcgcaaagcggcggaagagatagcggaagagacccgg
gaagatgtgcagcagctcgtggctctggctgctgcagaggagacaaatgcaacggagaag
gagagtgccgggcggaagccggcggcgaaaacgtccaccgcatcccctgccaaagcccct
gccaaagcccttccccgtccggcggagaccaccccgcgcgtggcaccgtctccccctccc
acgacgcccgtgagcgagccggccaaggacgatgccaagcccgagacgcccgctcctccc
cccgccatcgagtccatcaccacgactcctgctgccggagccgtcgatgagggcggtgct
cgccgcctcgtattcaggcacaagaacagctcctcggtattggatcaggtgctgccgtac
agctctccccagcccccgcagaggcccaaaccggccggtgctccggtcggcagcagcccg
atcaggcagcgacaggcggccggcgtgccgactccccgtcgcgaacctcagcaacctctc
tacaacttcgacggcatcctcgagtgcatgggtgtactggagatcatgcccgacgactac
ggattcctccgctcctcggactacaactatctgtcctctccggacgatgtgtacgtgtcc
cagcagcagatcaagcacaacggactcaagacgggcgacgtcgtggcaggtactatccgt
ccgcccagagagggggagaagtacttccccttcgtgcagctgcggagtgtgaacggtcgc
agccccgaagagatccgcgaccgcgtgcccttcgatcatctcacacccctcttccccgaa
gagaagttcaccctcgaagcaccgggcatccgtgccgtaaacgataaaatatccgtccgc
gtcgtagacctcttcgcccccataggcaaaggacagcgcggcctgatcgtatcgcagccc
aagacgggtaagacgatgctcctcaaggacattgccaatgccatcgcagccaatcacccc
gaagtgtacatgatcgtcctgctcatcgacgagcgtcccgaagaggtcaccgacatggcg
cgaagtgtgaacgccgaggtcatcgcttccaccttcgacgagccggcagagcgtcacgtg
aagatcgccgagatcgtcctgaacaaagccaaaagaatggtggagtgcggtcatgacgta
gtcatcctgctcgactccatcacccgcctggcacgtgcatacaataccgtacagcccgca
tcgggcaaggtgctctccggtggtgtcgatgccaatgccctgcagaagccgaaacgcttc
ttcggtgccgctcgcaacatcgaaaacggcggtagtctcaccattctggccacggcgctg
accgacacgggttctaagatggacgaggtgatattcgaagagttcaagggtacgggcaat
atggagctgcagctcgatcgccgcctgtccaacaaacgcatattccccgccgtggacatc
atgtccagcagtacccgtcgcgacgacttgctgcaggacgagaccacgctgaaccgtatg
tggatcctgcgcaagtacctctccgacatgaatcctgtcgaagccatggagtttgtgcgt
aagcagctggagaatacgcataccaatatggagttcctcgcctcgatgaacaactga
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